Brenneria goodwinii: AWC36_07770
Help
Entry
AWC36_07770 CDS
T05061
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bgj
Brenneria goodwinii
Brite
KEGG Orthology (KO) [BR:
bgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgj03032
]
AWC36_07770
03400 DNA repair and recombination proteins [BR:
bgj03400
]
AWC36_07770
Enzymes [BR:
bgj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AWC36_07770
DNA replication proteins [BR:
bgj03032
]
Prokaryotic type
DNA Topoisomerases
AWC36_07770
DNA repair and recombination proteins [BR:
bgj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AWC36_07770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
E217_gp28
Toprim_2
Toprim_4
Zn_ribbon_TFIIB
DUF7351
Motif
Other DBs
NCBI-ProteinID:
ATA24014
UniProt:
A0AAE8ES96
LinkDB
All DBs
Position
complement(1777977..1780574)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNAYVVKSSVGHVRDLPTSGSASKKSADSTKDKTKKTVK
KDEKSALVNRMGVDPYHGWKANYEILPGKEKVVSELKTLAENAEHIYLATDLDREGEAIA
WHLREIIGGDDNRFSRVVFNEITKNAIQQAFDNPDKLNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLIVDREREIKAFVPEEYWELHTDLLAGSDTQLQMQVTH
YNGKPFKPVNKTQTEAAVGLLEKARYAVAEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDALSMVRDYIGKEFGKNYLPDAANHYSNKEN
SQEAHEAIRPSDVKVVAEHLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLIVNAADY
QLRAKGRTLRFDGWTKVMPALRKNDEDRTLPMVAVGEQLALQKLLPAQHFTKPPARYSDA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMSY
DFTARMESSLDQVANNQAQWKAVLDEFFAEFSQQLETAEQDPEKGGMRPNQMILTSIDCP
SCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLIPEAEVLNVLEGDDAETNALRARR
RCPKCGTAMDSYLIDNQRKLHVCGNNPACDGYEIESGEFRIKGYDGPVVECEKCGSEMHM
KMGRFGKYMACTNESCGNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIF
LAANTFPKSRETRAPLVEELVRFKDRLPEKMRYLAEAPVVDKDGNKTMVRFSRKTKQQYV
ASEKEGKATGWSAFYVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatagttgagtccccggcaaaagccaaaacgatcaataagtat
ttaggcaatgcctacgtggtgaaatccagcgtcggtcatgtgcgcgatttgccgaccagt
ggctcagccagtaagaagagcgcggactcaaccaaagacaaaacgaaaaaaaccgtcaaa
aaggatgagaaatccgcgctggtgaatcgcatgggcgtcgatccttatcacgggtggaag
gcgaattatgaaattttgcccggtaaagagaaggtcgtttccgaattaaaaacgctggcg
gagaatgccgaacatatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaaatcatcggcggcgacgataatcgctttagtcgcgtcgtttttaat
gaaatcaccaagaatgcgatccagcaggcgtttgataatccggacaagttaaatatcgat
cgcgttaatgcccaacaggcccgccggtttatggatcgggtggtgggttatatggtttcg
ccgctgctgtggaaaaaaatcgcgcgcgggctgtcggcggggcgcgttcagtcggttgcg
gtacgtctgattgtcgaccgcgagcgtgaaatcaaggcatttgtgcctgaagagtattgg
gaactgcataccgacttgctggcggggagcgatacccaactacaaatgcaggtcacgcac
tataacggtaagccgtttaagccggttaataaaacgcagacggaagccgccgtcggcctg
ttggaaaaggctcgctatgcggtggcggagcgtgaagataagccaaccagcagtaaaccg
ggcgcgccgtttatcacgtctacgctgcagcaggccgccagcacgcgtttgggttttggc
gtgaaaaaaaccatgatgatggcgcagcgcctgtatgaagcgggccacattacctacatg
cgtaccgattcaaccaatctgagtcaggatgcgctgagcatggtgcgtgattatatcggc
aaagaatttggtaaaaattatctgcctgatgcggcgaaccattacagcaacaaagagaat
tcccaggaagcgcacgaagctattaggccttccgatgtgaaagtggtcgccgagcatctg
aaggatatggaagcggatgcgcagaagttgtatcagctgatttggcgccagttcgtggct
tgtcagatgacgccggcgaaatacgattccaccacgctgattgtcaacgcggctgattac
cagctgcgcgccaaagggcgcaccctgcgtttcgacggctggacgaaagttatgccggcg
ctgcgtaaaaacgatgaggatcgtacgttgccgatggtcgccgtcggcgaacaactggcg
ttgcagaagttgctgccggctcagcactttaccaagccgccggcacgctatagcgatgca
tccctggttaaagagttggagaagcgcggtatcggccggccttccacctatgcatcgatt
atctccaccattcaggatcgtggttatgtccgggtggaaaaccgtcgtttctatgcggag
aaaatgggcgagatagtgaccgatcgcctggaagaaaacttccgtgaactgatgagttac
gatttcaccgcccgcatggaaagcagcctggaccaggtggcgaacaatcaggcgcagtgg
aaagcggtgctggacgagttttttgccgagttcagccaacaattggaaaccgcggagcag
gatcccgaaaagggcggtatgcggcctaatcaaatgattctgaccagcatcgattgtccg
agctgtgggcgcaaaatgggcattcgtaccgccagcaccggagtcttcctcgggtgttcc
ggctacgcgttgccgccgaaagagcgttgtaaaaccaccatcaatctgatccctgaagcc
gaagtgcttaacgtactggaaggggatgatgcggaaaccaatgcgttgcgcgcccgtcgc
cgctgtcctaaatgcggcacggcgatggacagctatttgattgataaccaacgcaagctg
catgtctgcggtaacaacccggcgtgcgatggctatgagattgaaagcggcgagttccgt
attaaaggctacgacggcccggtggttgaatgtgaaaaatgcgggtcggaaatgcatatg
aaaatgggccgatttgggaagtatatggcctgtaccaacgaaagctgcggcaatacgcgt
aaaattctgcgcaatggcgaggtcgcgccgccgaaggaagatccggttcctttgccggag
ctgccgtgtgagaaatccgatgcctatttcgtcttgcgtgacggcgcggcgggtattttc
ctggcggccaatactttccctaaatcccgcgagacgcgtgcgccgttggtagaagaactg
gtgcgctttaaagatcgtctgccggagaaaatgcgttatctggccgaggcgccggtagtt
gataaagatggcaataaaaccatggtgcgctttagccgcaagaccaaacagcagtatgtg
gcgtctgagaaagagggcaaagcaaccggatggtcagccttctatgttgatggcaaatgg
gtcgaagggaagaagtaa
DBGET
integrated database retrieval system
