Brenneria goodwinii: AWC36_12225
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Entry
AWC36_12225 CDS
T05061
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bgj
Brenneria goodwinii
Pathway
bgj03030
DNA replication
bgj03430
Mismatch repair
bgj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWC36_12225 (holA)
03430 Mismatch repair
AWC36_12225 (holA)
03440 Homologous recombination
AWC36_12225 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgj03032
]
AWC36_12225 (holA)
03400 DNA repair and recombination proteins [BR:
bgj03400
]
AWC36_12225 (holA)
Enzymes [BR:
bgj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWC36_12225 (holA)
DNA replication proteins [BR:
bgj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWC36_12225 (holA)
DNA repair and recombination proteins [BR:
bgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWC36_12225 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ATA24814
UniProt:
A0AAE8EKH5
LinkDB
All DBs
Position
2782717..2783751
Genome browser
AA seq
344 aa
AA seq
DB search
MIRLYPEQLAAQLHEGLRACYLICGNDPLLLQESLDGIRRVAQQQAFSEHFSFTLDVHTD
WDAIFSTCQALSLFATRQTLLLILPENGPNAAMAENLVKLSGLLHQDVLLMLRGNKLTKA
QENSAWFKALSKNGVYVSCLTPEQAQLPRWVAQRAKAMKLDLDEAAGQLICYCYEGNLLA
LAQALERLSLLYPDGKLTLPRVEQAVSDSAHFTPYHWLDALLAGKSKRAWHILHQLRQED
CEPVILLRTIQRELLLLLTLKRQMAKTPLRSLFDQHKVWQNRRDLLTQALQRLHMTQLQQ
AIGLLSKLEITLKQNYGQSVWPELETLSMILCGKDLPESLLDVN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtctttacccggaacagctcgccgcgcaactccatgaggggttgcgcgcctgt
tatttgatctgcggtaacgatccccttctgctacaggaaagcctggacggcattcgccgc
gtcgctcagcaacaggcattcagcgaacattttagcttcacgctggatgtccacaccgac
tgggatgctatcttcagtacctgtcaggccctcagcctgttcgctacccgtcaaacgcta
ttgctgatactgccggaaaacggcccgaatgcggcgatggctgaaaatctggtcaagcta
tccggcttattgcatcaggatgttttactgatgctgcgcggcaataaattgaccaaagcg
caggaaaacagcgcctggttcaaggcattgtcaaaaaacggcgtttacgtcagttgcctg
actccggagcaggcgcagttaccccgctgggtcgcccagcgcgccaaagccatgaagctg
gatctggacgaagcggccggccagcttatctgctactgctatgaaggaaatcttctggcg
ctggcgcaggcgctggagcgtttgtcgctgctttatcccgatggcaaactcaccctgccc
cgcgttgagcaagcggttagcgattccgcgcatttcacgccgtatcactggcttgacgca
ctgctggccggcaaaagcaaacgcgcctggcatattctgcatcaactcagacaggaagac
tgcgaacccgttattctgctgcggacgatacagcgagaattgcttctgctgctaaccctg
aaacggcaaatggcgaaaacgccgctgcgttcgctgtttgatcagcataaagtctggcag
aaccgcagggatctgttaacgcaggcgctgcaacgtttgcacatgacgcagttgcaacag
gcgatcggcctgttgtctaaactggagatcacgctaaagcagaattatggtcagtcggtc
tggcctgaactggaaaccctttccatgatattgtgcggtaaagacctaccagagagtctg
ttagatgttaactag
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