KEGG   Brenneria goodwinii: AWC36_13575
Entry
AWC36_13575       CDS       T05061                                 
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bgj  Brenneria goodwinii
Pathway
bgj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bgj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AWC36_13575 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgj03400]
    AWC36_13575 (recD)
Enzymes [BR:bgj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AWC36_13575 (recD)
DNA repair and recombination proteins [BR:bgj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AWC36_13575 (recD)
SSDB
Motif
Pfam: AAA_19 RecD_N AAA_30 Viral_helicase1 UvrD_C_2 Helicase_RecD AAA_11 SH3_13 AAA_22 UvrD-helicase PhoH SLFN-g3_helicase AAA_16 nSTAND3 DEAD Herpes_Helicase MukB AAA_28 T2SSE TrwB_AAD_bind CbiA SRP54 ATPase AAA UvrD_C AAA_17 Flavi_DEAD Zeta_toxin NTPase_1
Other DBs
NCBI-ProteinID: ATA25067
UniProt: A0AAE8EP97
LinkDB
Position
complement(3089622..3091496)
AA seq 624 aa
MIELLETALQRRLLRPLDIQFARMLADDDNPQLLLAAACLSAQSGAGHVCLPLPVLQPEL
LFDGRDRELAQSVWEAAGQMDAAGWRQCLSASPAVSDGNSPTPLVLQQQNLYLQRSWQSE
GQVARFIAGEYHAPSVDEPHIRTVLDSLFPPAGGETDWQKIAAAVALTRRITVISGGPGT
GKTTTVAKLLAALIQLNAGAALRIQLAAPTGKAAARLTESLGAALNNLSLSQAHRDRFPQ
EATTLHRLLGAVPDSQRLRHHRGNPLHLDVLVVDEASMVDLPMMANLIAALPEQAKVIFL
GDRDQLASVEAGAVLGDICRFAEAGYSRTRAQQLQRLTGCRLDDDGAENRVTVGDSICLL
RKSYRFDRHSGIGQLALAVNNGDDRRVTAVLNGAFTDIACRPLDTTEDYQQMLAQCIEGY
RDYLRLIAADAGPEAVLLAFQRYRQLCALREGPFGVAGLNQRIEQALHQAGLIQRSRNPL
NRWYIGRPVMIERNDAVLGLFNGDIGITMPGEKGEPRVYFQLPSGKTKAVAPSRLPPHDT
AYAMTVHKSQGSEFEHTSLILPNHYLPVLTRELVYTAITRARQRLSLYADINILCRAVKT
PTQRHSGLVERIMALMSAENDGNV
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgattgagttactcgaaacggcattgcagcgtcggcttctgcgtccgctggatatccag
tttgccagaatgctggcggatgatgacaaccctcaattactgctggccgccgcctgtttg
agcgcgcagtccggcgccgggcacgtttgcctgccgttgccggtattacagcccgagctg
ctgtttgatggccgcgatcgtgaattggcgcagtcggtatgggaggcggccggtcagatg
gacgccgccggctggcggcagtgcttgtcggcttccccggcggtcagtgacggcaatagc
ccgacgccgctggtattgcagcaacaaaatctctatttgcagcgcagctggcagagcgaa
gggcaggtcgcgcggtttattgccggtgaatatcacgcgccttcggtcgatgaaccgcat
atccgcacggtgcttgatagcctgttcccgccggccggcggtgaaaccgactggcagaaa
atcgccgccgccgtggcgttgacccggcgcatcaccgtgatttccggtggacccggcacc
ggtaagaccaccacggtcgccaaactattggccgcgttgattcagcttaatgcgggagcg
gcgttgcgtattcaactggcggcgccgacggggaaagcagcggctcggttaaccgagtcg
ctgggcgcggcgttgaataacctatcgctaagccaggcccatcgcgaccgctttccgcag
gaggcgacgacgctgcaccgtttattgggcgcggtgcctgatagtcaacgtttgcgccat
catcgcgggaatccgttacaccttgatgtcctggtggtggacgaagcctcaatggttgat
ctgccgatgatggcgaatctgattgccgcgttgcccgaacaggcaaaagtcatctttctg
ggcgatcgcgatcagctggcctcggtggaggcgggcgcggtgctgggggatatctgccgc
tttgccgaggcgggctacagccggacaagggcgcagcagctacagcgcttgaccggctgt
cggcttgatgatgacggggccgaaaaccgggtaaccgtgggggatagcatttgtctgttg
cgcaaaagctatcgttttgatcggcattccggcatcgggcaattggccctggcggtgaat
aatggcgatgacaggcgagtgacggcggtgttgaacggtgcgtttacggatatcgcctgt
cgtccgctggatacgacggaagattaccagcagatgctggcgcagtgcattgaaggttac
cgggattatttacggcttattgccgccgatgcggggccggaggcggttttgctggctttt
caacgctatcgccaactgtgtgctctgcgtgaagggccgtttggcgtggcggggcttaac
cagcggattgagcaggcattacatcaggccgggctgatccaacgcagccgtaatccgctt
aatcgctggtatatcggccgtccggtgatgatcgagcgtaatgatgcggtgctggggctc
tttaatggcgatatcggtattaccatgccgggtgaaaagggggaaccgcgggtctatttc
caactgcccagcggcaaaaccaaggccgtggccccgagccgtttaccgccgcacgatacg
gcctatgcgatgacggtgcataaatcgcaggggtcggaattcgaacatacctcgctgata
ttgccgaatcattatctgccggtattaacacgcgaactggtttataccgccattacccgc
gcgcgtcagcgcttgtcgctgtacgcggacataaacattttgtgtcgggcggtgaaaacg
ccgacccagcgtcatagcgggctggttgagcgaatcatggcgctaatgtcggcggaaaat
gacgggaatgtctga

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