Brenneria goodwinii: AWC36_20205
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Entry
AWC36_20205 CDS
T05061
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgj
Brenneria goodwinii
Pathway
bgj03420
Nucleotide excision repair
bgj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWC36_20205 (uvrD)
03430 Mismatch repair
AWC36_20205 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgj03400
]
AWC36_20205 (uvrD)
Enzymes [BR:
bgj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWC36_20205 (uvrD)
DNA repair and recombination proteins [BR:
bgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWC36_20205 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AWC36_20205 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
ATA26243
UniProt:
A0A0G4JU79
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All DBs
Position
4626621..4628783
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AA seq
720 aa
AA seq
DB search
MDVSALLDGLNDKQRDAVAAPRGNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIRALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNRIQYAWIRMLAGDS
ANVMIVGDDDQSIYGWRGAQVENIQLFLQDFAGAQTIRLEQNYRSTSNILNAANALIAHN
GGRLGKNLWTDGVEGEPISLYCAFNELDEARFVVNRIKVWQENGGALSDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQSTRALLQEKVLAGRAASALQRFVELVDALADETAELPLHVQ
TDRVIKDSGLWGMYEQEKGEKGQARVENLEELVTATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAHQDSVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLILTYAESRRLYGKEAYHRPSRFVGELPAECVEEVRLRASVSRPVNHQRLG
TPVSENDSGYRLGQRVRHDKFGEGTIVNLEGSGDHCRIQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgctctacttgatggcctcaacgacaaacaacgtgatgcggtagccgcg
ccgcggggcaatttattggtgctggcgggcgcgggcagcggcaagacgcgggtgctggtg
catcgtatcgcctggctgttgtccgtcgaaaattgttccccctattccattatggcggtg
acgtttaccaacaaggccgcggcggaaatgcgtcaccgtatcgaacacctgatcggcacc
agccagggcggcatgtggattggcacctttcatggtttggcgcatcgtctgttgcgggct
catcatctggatgccggtttgccgcaggatttccagatcttggacagcgaagatcagctg
cgtttgcttaagcgcttgattcgagcgctgaatctggacgagaaacagtggccgccgcgt
caggccatgtggtatatcaacggtaagaaagatgaggggttacgccctcagcatattgaa
agttatggtaatccgatagaacaaacctggcagcgggtttatcaggcctatcaggaagcc
tgcgatcgcgccgggctggtggattttgccgagttactgctgcgggcccacgaactgtgg
ctgaataagccgcatatcctgaatcattaccgtgagcgttttaccaatattctggtggat
gaatttcaggataccaaccgtattcaatacgcctggatccgcatgctggcgggcgatagc
gccaatgtgatgatcgtgggtgatgacgaccagtccatttacggctggcgcggcgcgcag
gtggaaaacattcagctgtttctccaggatttcgccggcgcacagaccattcggctggag
caaaattaccgttcaaccagcaatatcctgaatgcggctaacgccctgattgcgcataac
ggcgggcgtttaggcaagaatttatggacggacggcgtagagggcgagccgatttcgctc
tattgcgcgtttaacgaactggatgaagcgcgctttgtggtcaaccggattaaagtctgg
caggaaaacggcggcgcgctgagcgataacgcgattttgtaccgcagcaacgcccagtcg
cgcgtgctggaagaagctttgttgcagcagagtatgccgtaccgtatttatggcggaatg
cgcttcttcgagcggcaggaaatcaaagacgcgttggcttacctgcgtttgattgccaac
cgcaatgatgatgcggcgtttgagcgcgtggtgaatacgccgacgcgcggcatcggcgac
agaacgctggatgtggtgcgtcagacctcgcgcgatcggcagttaacgctctggcagtcg
acgcgtgcgctgttgcaggagaaagtgctggcgggcagggcggcatccgcgctgcagcgt
ttcgttgaactggtcgacgcgctggctgatgaaaccgccgagctgccgctgcatgtgcaa
accgaccgggtgatcaaagattccggcctgtgggggatgtacgaacaggagaaaggcgaa
aaagggcaggcgcgggtggaaaaccttgaggaactggttaccgccacgcggcagtatagc
tatcaggatgaagatcaggatctgatgccgttgcaggcatttttatcgcatgcggcgctg
gaagcgggagaagggcaggcggatgcccatcaggattcagtgcagttgatgacgctgcac
tcggcgaagggactggagttcccgcaggtatttatcgtcgggatggaggagggcatgttc
cccagccagatgtcgcttgacgaaggcggccggctggaggaggagcggcgtctggcctat
gtgggcgtgacgcgagccatgcagaaactgatcctgacgtacgcggagtcccggcgttta
tacggcaaagaagcgtatcaccgtccgtcccgttttgtcggcgaactgccggcggaatgc
gtcgaggaagtgcggctgcgggccagcgtgtcccgcccggtcaaccatcagcgcctcggc
acgccggtaagtgaaaacgacagcggctaccgtctggggcagcgggtgcggcatgacaaa
ttcggcgaaggcaccatcgtcaacctggaaggcagcggcgatcactgccggattcaggtg
gcatttcaggggcagggcattaagtggctggtggcggcttatgcccggctggagacggta
tga
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