Brenneria goodwinii: AWC36_21930
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Entry
AWC36_21930 CDS
T05061
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bgj
Brenneria goodwinii
Pathway
bgj02024
Quorum sensing
bgj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWC36_21930 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWC36_21930 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgj03019
]
AWC36_21930 (hfq)
03036 Chromosome and associated proteins [BR:
bgj03036
]
AWC36_21930 (hfq)
Messenger RNA biogenesis [BR:
bgj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AWC36_21930 (hfq)
Chromosome and associated proteins [BR:
bgj03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AWC36_21930 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ATA26544
UniProt:
A0A0G4JVC6
LinkDB
All DBs
Position
5031978..5032274
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AA seq
98 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNPGTSNYHGSNPAGQQQPQESDDAE
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagatccgttcctgaacgcattgcgtcgcgaacgtgtt
ccggtttcgatttatttggtgaatggtattaagttgcagggtcagattgaatctttcgat
cagtttgtcattttgttaaaaaatacggttagccagatggtgtataaacacgccatttct
acagtagttccatctcgtccggtgtctcatcacagtaataatccaggcaccagcaattat
catggtagcaatccggctggacagcaacagccgcaggaaagtgatgacgctgaataa
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