KEGG   Bradyrhizobium genosp. L: IC762_04905
Entry
IC762_04905       CDS       T09261                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bgk  Bradyrhizobium genosp. L
Pathway
bgk00010  Glycolysis / Gluconeogenesis
bgk00020  Citrate cycle (TCA cycle)
bgk00260  Glycine, serine and threonine metabolism
bgk00280  Valine, leucine and isoleucine degradation
bgk00310  Lysine degradation
bgk00380  Tryptophan metabolism
bgk00620  Pyruvate metabolism
bgk00630  Glyoxylate and dicarboxylate metabolism
bgk00640  Propanoate metabolism
bgk00670  One carbon pool by folate
bgk00785  Lipoic acid metabolism
bgk01100  Metabolic pathways
bgk01110  Biosynthesis of secondary metabolites
bgk01120  Microbial metabolism in diverse environments
bgk01200  Carbon metabolism
bgk01210  2-Oxocarboxylic acid metabolism
bgk01240  Biosynthesis of cofactors
Module
bgk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bgk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bgk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bgk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bgk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    IC762_04905 (lpdA)
   00020 Citrate cycle (TCA cycle)
    IC762_04905 (lpdA)
   00620 Pyruvate metabolism
    IC762_04905 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    IC762_04905 (lpdA)
   00640 Propanoate metabolism
    IC762_04905 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    IC762_04905 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    IC762_04905 (lpdA)
   00310 Lysine degradation
    IC762_04905 (lpdA)
   00380 Tryptophan metabolism
    IC762_04905 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    IC762_04905 (lpdA)
   00670 One carbon pool by folate
    IC762_04905 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bgk04147]
    IC762_04905 (lpdA)
Enzymes [BR:bgk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     IC762_04905 (lpdA)
Exosome [BR:bgk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   IC762_04905 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Pyr_redox_3 NAD_binding_8 FAD_binding_2 Thi4 AlaDh_PNT_C HI0933_like DAO FAD_binding_3 3HCDH_N GCV_H
Other DBs
NCBI-ProteinID: QPF85659
UniProt: A0A7S9CU78
LinkDB
Position
1070723..1072435
AA seq 570 aa
MRTEEIRVPDIGDFRDVEVVEVHVRADDVVVREQALITVESDKATLEIPSPIAGVITSMS
LRVGDKVSQGSMIGTASASDEAGAQGETISADQDVGQRATDYTRYDLVVIGGGPGGYSAA
FRAADLGLNTAIIERYGTLGGVCLNVGCIPSKALLHVAAVKEEAERIADKGIRFAAPQID
LQELRAFKHGTVKKLTDGLSQMAAARRVTVIRGIAKFASATRLEIVGEGAGSQQIEFGQC
IIATGSRAVQLAVLPKHERVVTSTGALALRSIPGRMLVIGAGIIGLEMATVYNSLGTKID
LVERLPDILAGVDADAVKIWRSCNAHRFEHIDVASSVSTAEITPDGVRVGTTGASVRTRS
YDLVLQSAGRVPNSSELGLERIDVAIDSNGFIQVDEQMRTTARNVFAIGDVVGGSMLAHK
AVHEGHVAAEVAAGKPAAFTAKIVPNVAYTDPEIAWVGKSERDVAESGRKIRSTKFPWAA
SGRAIASGASYGMTKLLFDAETGRIVGGVIVGPHAGDMIGEICLAIEMGADAIDIGKTIH
PHPTLGETIGMAAEVHEGICTDLPPIARKR
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgcggacagaggaaatccgggtccccgacatcggggattttcgagacgtcgaggtcgtc
gaggtccacgtcagggcggacgacgtcgtcgtgcgagagcaggcgttgatcacagtggaa
tccgacaaggccacgctggagattccgtcgccgatcgcaggggtgatcacgagcatgtcg
ctgcgtgttggagacaaggtgtctcaaggctccatgattggcacggcgtcggcgtcggac
gaagcgggcgcgcaaggcgagacgatctcagcggatcaggatgttggccagcgcgcaaca
gattatacgcgctacgatcttgtcgtgatcggaggcgggccgggcggctattcagcagcg
tttcgggccgcagaccttggactgaacaccgcgatcatcgaacgctacggcaccttgggc
ggagtttgcctgaacgttggatgtatcccgtcgaaggcgctgcttcatgttgcggccgtc
aaggaggaagccgaacggatcgcggacaagggcattcgcttcgccgcgccgcagatcgat
ctgcaggagctgcgcgccttcaagcacggcactgtcaagaagctgacggatgggctgagc
cagatggcagcagcgcgccgcgtcacggtgatccgcggcatcgcgaaattcgcctccgcc
acgcggctcgagattgtcggtgagggggcaggctcgcagcaaattgaatttggtcaatgc
atcatcgccacgggctcgcgcgcggtgcagctagcggtgcttcccaagcatgagcgggtc
gtgacctcgaccggcgcgctcgcgctgcgaagcattccgggccgcatgctcgtgatcgga
gcggggatcatcgggttggagatggcgaccgtctacaactcgctcggcaccaagatcgat
cttgtcgaaaggcttcccgatatcctggcgggcgtggatgccgacgcggtgaagatctgg
cgttcgtgcaacgcgcatcgcttcgagcatatcgacgtcgcaagcagcgtatcaaccgcc
gaaatcacgccggacggcgtgagggtcggtaccacaggcgcatcggtacggacacgatcg
tacgatttggtgttgcaatcagccggccgtgttcctaacagtagcgaactcggcctcgaa
cggatcgacgttgccatcgattcgaacggcttcattcaggtcgacgagcagatgagaacg
acggcgcgcaacgtcttcgccatcggcgacgtcgtcggcggttcgatgctggcgcacaag
gccgttcacgaggggcacgtcgccgcggaagtagctgccgggaagccggcggcctttacc
gcgaagatcgtccccaatgtcgcctacaccgatcctgagatcgcctgggtcggcaagtcc
gagcgtgatgtcgccgaatccggacggaagatccgttcgacaaaattcccatgggccgcg
tccggccgggccatcgcgtcgggcgcatcctatggcatgacgaagctgctgttcgacgcc
gaaaccggtcgcatcgtcgggggcgtgatcgtcggaccgcatgccggcgatatgatcggg
gaaatctgtctcgctatcgaaatgggggctgacgcgatcgatatcggaaagaccattcac
ccgcatccgaccctcggcgagacgatcggcatggctgccgaagtccatgagggcatttgc
accgacctgcctccaatcgccagaaagcggtag

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