Bradyrhizobium genosp. L: IC762_20940
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Entry
IC762_20940 CDS
T09261
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bgk
Bradyrhizobium genosp. L
Brite
KEGG Orthology (KO) [BR:
bgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgk03032
]
IC762_20940 (topA)
03400 DNA repair and recombination proteins [BR:
bgk03400
]
IC762_20940 (topA)
Enzymes [BR:
bgk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IC762_20940 (topA)
DNA replication proteins [BR:
bgk03032
]
Prokaryotic type
DNA Topoisomerases
IC762_20940 (topA)
DNA repair and recombination proteins [BR:
bgk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IC762_20940 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Milton
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QPF82237
UniProt:
A0A7S9CN24
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All DBs
Position
4422975..4425731
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AA seq
918 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFQMIWEVDAKAAG
RLNDIAKALKGADRLILATDPDREGEAISWHVLEVMKEKRALKDQKVERVVFNAITKQAV
TDAMKAPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLVATLLTPRGEAFEARLVGADGKKIQRLDIGSGAEAEDLKKAIEAA
LFKVATVEAKPARRNPQAPFTTSTLQQEASRKLGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDPSAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDLSR
RPASIGRRLDADQARLYELIWKRTIASQMESAELERTTVDIEAKAGSRVLELRATGQVIK
FDGFLALYQESRDDEEDEDSRRLPAMSEGEAVKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLENFFARYVEYDFTADLE
EQLDRISNNEVAWQQVLQDFWRGFIGAVNDIKDLRVAEVLDALDEMLGPHIYPPRADGGD
VRQCPTCGTGRLNLKAGKFGAFVGCSNYPECRYTRQLAADSAESADRILGTDPDTGLDVA
VKIGRFGPYIQRGEQKDYEEGEKPKRTGIPKGISPGDVDLEIALKLLSLPREVGKHPETG
QPIIADNGRFGPYVKHEKTYASLEAGDEVFTIGLNRAVTLIAEKVAKGPSGRRFGADPGK
PLGDHPSLGAVALKNGRYGAYVTAGGVNATIPSDKTPDEVTLAEAIALIDERAAKGGGKT
KGKKAKAAKPAKETKAAKADGEAKPAKKTAAKKAAAKPKSEATTKARAPVASNSNTSAAK
PAATTKAPAKKSAGKARG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgcctgccaaggccaagacgatcaacaaatatctgggg
tcctcctacgaggtcctggcgtcgttcggccatgtccgcgacctcccggccaagaacgga
tcggtcgatccggacgccaatttccagatgatctgggaagttgacgccaaggccgccggc
cgtctcaacgacatcgcgaaggcgctcaaaggtgccgaccgcctgattctcgcaaccgac
cctgatcgcgagggcgaagcgatctcctggcacgtgctggaagtgatgaaggagaagcgc
gcgctgaaggatcagaaggtcgagcgcgtcgtgttcaacgccatcaccaagcaggcggtc
accgacgccatgaaggcgccgcgccagatcgacggcgcgctggtcgatgcctatatggcg
cgccgtgcgctggactatctggtcggcttcaccctctccccggtgctgtggcgcaagctg
cccggggcgcgctcggccggccgcgtgcagtcggtcgcgttgcggctggtctgcgaccgc
gagctcgagatcgagaagttcgtcccccgcgaatactggtcgctggtcgcgacgctcttg
acgccgcgcggcgaggcgttcgaggcgcgtctggtcggcgccgacggcaagaagatccag
cggctcgacatcggctccggtgcggaagccgaggatctcaaaaaggcgatcgaggccgcg
ctgttcaaggtcgcgaccgtcgaagccaagccggcgcggcgcaatccgcaggcgcccttc
accacctcgaccctgcagcaggaagccagccgcaagctcggcttcgcgccggcgcacacc
atgcgcatcgcgcagcggctctatgaaggcatcgacatcggcggcgagaccaccggcctc
atcacctatatgcgaaccgacggcgtgcagatcgatccgtccgccatcacccaggcgcgc
aaggtgatcggcgaggattacggcaacgcctatgtgcccgacgccccgcgccagtaccag
gccaaggccaagaacgcccaggaagcgcacgaagcgatccgcccgaccgatctgtcgcgc
cggccggcctcgatcggccgcaggctcgatgccgaccaggcgagactctatgaattgatc
tggaagcgcaccatcgcgagccagatggaatccgccgaactcgagcgcaccaccgtcgac
atcgaggccaaggccggctcccgcgtgctggagctgcgcgccaccggtcaggtcatcaag
ttcgacggtttcctcgcactctatcaagagagccgtgacgacgaggaggacgaggattca
cgccgcctgcccgcgatgagcgaaggcgaagccgtgaagcgccagagcctcgccgtcacc
cagcacttcaccgagccgccgccgcgcttctcggaagcctcgctggtgaagcggatggaa
gagctcggcatcggccggccctcgacttacgcttcgatcctgcaagtgctgaaggaccgc
ggctacgtcaagctggagaagaagcggctgcacggcgaggacaagggccgcgtcgtggtc
gcgttcctggaaaatttcttcgcgcgctacgtcgaatacgacttcaccgccgatctcgag
gagcagctcgaccgcatctccaacaacgaggtggcctggcagcaggtgctgcaggatttc
tggcgcggcttcatcggcgcggtcaacgacatcaaggacctccgcgttgccgaagtgctc
gacgcgctcgacgagatgctcggcccgcacatctatccgccgcgcgcggatggcggcgat
gtcaggcaatgtccgacctgcggcaccggccggctcaatttgaaggccggcaagttcggc
gccttcgtcggttgctcgaactatccggaatgccgctacacccgccagcttgccgccgac
agcgccgagagcgccgaccgcatcctcggcaccgatcccgacaccgggttggatgtcgcc
gtgaagatcggccggttcggcccgtatatccagcgtggcgagcagaaggactacgaggaa
ggcgagaagccgaagcgcacgggtatccccaagggcatctcgcctggcgacgtcgacctc
gaaatcgcgctgaagctgctgtcgctgccgcgcgaggtcggcaaacatccggaaaccgga
cagccaatcatcgccgacaatggccggttcgggccttacgtgaagcacgagaagacctat
gccagcctcgaggccggcgacgaggtcttcaccatcgggctcaatcgcgctgtgacgctg
atcgcggagaaggtcgcgaaggggccgagcggacgccgtttcggcgccgatccgggcaag
ccgctcggcgatcatccctcgctcggcgcggtcgcgctgaagaacggccgctacggcgcc
tatgtcaccgctggcggcgtcaacgccacgatcccgagcgacaagacgcccgacgaggtc
acgctggccgaggcgatcgccctgatcgacgagcgcgccgccaagggcggcggcaagacc
aagggcaagaaggccaaggcggcgaagccggccaaggaaacaaaggctgcgaaggccgat
ggtgaggccaagcccgccaagaagacggcggccaagaaggccgcggcgaaaccaaaatcc
gaggcgaccaccaaggcgcgcgcgccggtcgcatcgaactcgaacacttcagccgcgaag
cccgcggcgacaaccaaagcgccggcaaaaaagagtgccggcaaggcaagaggataa
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