Bradyrhizobium genosp. L: IC762_32190
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Entry
IC762_32190 CDS
T09261
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgk
Bradyrhizobium genosp. L
Pathway
bgk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IC762_32190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgk03019
]
IC762_32190
Enzymes [BR:
bgk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IC762_32190
Messenger RNA biogenesis [BR:
bgk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IC762_32190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HEM4
SUa-2TM
CMS1
Motif
Other DBs
NCBI-ProteinID:
QPF84226
UniProt:
A0A7S9GT55
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All DBs
Position
6751390..6752808
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AA seq
472 aa
AA seq
DB search
MTSFQDFGLADPIARALREENYLTPTPIQAQTIPLALAGRDVVGIAQTGTGKTASFALPI
LHRLLENRVRPQPKTCRVLVLSPTRELSGQILDSFNAYGRHIRLSSALAIGGVPMGRQVR
AVMQGVEVMVATPGRLLDLVQSNGLKLNQVEFLVLDEADRMLDMGFINDIRKIVAKLPIR
RQTLFFSATMPKDIAELAEAMLRDPARVAVTPVSSTVERIAQRVIQVDFAAKPAILAQLL
KQEPVNRALVFTRTKHGADKVVKGLAKAGIEANAIHGNKSQNHRERTLAAFRTGEIRTLV
ATDIAARGIDVDGISHVVNFDLPNIPETYVHRIGRTARAGAEGVAISLVAGAEEMGYLRD
IERLIKITVPREDRRTQGGREAAAPAQAPHPHRGGRSAPRAHNVRGNEPAPSAKGPRRRR
RGGGNNGAPQTSRGESPRPSQAGSSEGIQGVAFLHRESRPKPQPNRNNRPKH
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgacctcctttcaggatttcggcctcgccgatcccatcgcccgcgcgcttcgagaagag
aactatctcacgccgacccccatccaggcccaaaccatcccgctcgcgcttgccggccgc
gatgtcgtcggcatcgcccagaccggcaccggcaagactgcgtccttcgcgctgccgatc
ctgcaccgcctgctcgagaaccgcgtccgtccgcagccgaagacctgccgcgtgctggtg
ctctcaccgacccgcgagctgtccgggcagatcctcgacagcttcaacgcctatggccgc
cacatccgcctgtcctcggcgctggcgatcggcggcgtcccgatgggccgccaggtccgc
gccgtgatgcagggcgtcgaggtgatggtggccacccccggccgcctgctcgacctcgtg
cagagcaatgggctgaaactcaaccaggtcgagttcctggtgctcgatgaagccgaccgc
atgctcgacatgggcttcatcaacgacatccgcaaaatcgtcgccaagctgccgatccgg
cggcagacgctgttcttctcggccaccatgcccaaggacatcgccgagctcgccgaagcg
atgctgcgcgaccccgcccgcgtggcggtgacgccggtgtcctcgacggtcgagcgcatc
gcccagcgtgtgatccaggtcgatttcgcggccaagccggcgattctcgcccagcttctg
aagcaggagccggtcaaccgcgccctggtcttcacccgcaccaaacacggcgccgacaag
gtcgtgaagggcctcgccaaggccggtatcgaagccaatgcgatccatggtaacaagtcg
cagaaccaccgcgagcgcacgctggccgcgttccgcaccggcgaaatccgcacgctggtg
gcgaccgacatcgccgcccgcggcatcgacgtcgacggcatcagccatgtcgtcaatttc
gacctgcccaacatcccggaaacctatgtccaccgcatcggccgcaccgcgcgcgccggc
gccgagggcgttgcgatctcgctggtcgcaggagccgaggagatgggttatctgcgcgac
atcgaacggctgatcaagatcacggtgccgcgggaagaccgccgcacgcagggcggtcgc
gaggcggctgcgccagcgcaggcgccccatccacaccggggcggccgctcagcgccccgc
gcccacaatgtccgtgggaatgaaccggctccgagtgcaaaaggccctcgccgccgccgc
cgtggaggtggtaataacggcgcgccgcagacgagccggggcgagtcgccgcgtccgtcg
caggccggcagcagcgaaggcattcagggcgtcgccttcttgcatcgcgagagccggccg
aaaccgcaacccaaccgcaacaaccgaccgaagcactag
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