Burkholderia glumae BGR1: bglu_1g26570
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Entry
bglu_1g26570 CDS
T00905
Name
(GenBank) Putative ATP-dependent RNA helicase 2
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgl
Burkholderia glumae BGR1
Pathway
bgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bglu_1g26570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgl03019
]
bglu_1g26570
Enzymes [BR:
bgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
bglu_1g26570
Messenger RNA biogenesis [BR:
bgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
bglu_1g26570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ACR29732
LinkDB
All DBs
Position
1:complement(3024868..3026310)
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AA seq
480 aa
AA seq
DB search
MSDSAVTPVDATFDQFGLAPDILKAIADQGYTKPTPIQAKAIPVVLSGRDVMGAAQTGTG
KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHSYAKHTALRSAV
VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQMLVLDEADRMLDMGFLP
DLQRILNLLPKARQTLLFSATFSPEIKKLAATYLTNPQTIEVARSNATATNVTQIVYDIA
EGDKQAAVVKLIRDRALKQVIVFCNSKIGASRLARLLERDGVVATAIHGDRSQNERMQAL
EAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSL
CSPNERKQLADIEKLIKRDLPLQPLAIEAPVRMRREHGERSERGSRDEARAPRRAHGGER
GHHHHSRREAPVDEFFLKPYEPSPSARQPEEASKPAQTEKKSKQPLAALLGGFGMPRRSS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcagcagtcacgcccgtcgatgcaactttcgatcagttcggcctcgcgccc
gacattctgaaggccattgcggaccagggctacacgaagcccacgccgatccaggcgaaa
gcgattccggtcgtgctgtccgggcgcgacgtgatgggcgccgcgcagacgggcaccggc
aagaccgccagcttttcgctgccgatcatccagcggctgctgccgcaggccaacacgagc
gcctcgcccgcgcgccacccggtgcgcgcgctgatcctcacgccgacgcgcgagctggcc
gaccaggtggccgccaacgtccattcctatgcgaagcacacggcgctgcgcagcgccgtg
gtgttcggcggtgtcgacatgaacccgcagatggccgagctgcggcgcggcgtcgagatc
ctgatcgccacccccggccggctgctcgatcacgtccagcagaagacggcgaacctcggg
caggtgcagatgctggtgctcgacgaggccgaccggatgctcgacatgggctttctgccc
gacctgcagcgcatcctgaacctgctgccgaaggcgcgccagacgctgttgttctcggcg
acgttctcgcccgaaatcaagaagctggccgccacctacctgaccaacccgcagaccatc
gaggtcgcgcgcagcaacgcgaccgcgaccaacgtcacgcagatcgtctatgacatcgcc
gagggcgacaagcaggcggccgtggtcaagctgatccgcgatcgcgcgctcaagcaggtg
atcgtgttctgcaacagcaagatcggcgcgagccggctcgcgcgcctgctcgagcgcgac
ggcgtggtcgccacggcgattcacggcgaccgctcgcagaacgagcggatgcaggcgctc
gaggcgttcaagcgcggcgaggtggaggcgctggtggccaccgacgtggccgcgcgcggg
ctcgacatcgccgagctgccggccgtgatcaacttcgacctgccgttcagcgccgaggac
tacgtccaccggatcggccgcaccggccgcgcgggcgcctcgggcgatgcgctgtcgctg
tgcagcccgaacgagcgcaagcaactcgccgatatcgagaagctgatcaagcgcgacctg
ccgttgcagccgctcgcgatcgaggcgccggtgcgcatgcgccgcgagcatggcgagcgc
agcgagcgcggcagccgcgacgaagcgcgcgcgccgcgcagggcgcatggcggcgaacgt
ggccatcatcatcattcgcgtcgcgaggcgccggtcgacgagtttttcctgaagccctac
gagccctcgccgagcgcgcgtcagccggaagaggccagcaagcccgcgcagaccgagaag
aagtcgaagcagccgctcgcggccttgctcggcggtttcgggatgccgcgccgctcctca
tag
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