Bordetella genomosp. 13: CAL15_00695
Help
Entry
CAL15_00695 CDS
T05441
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAL15_00695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgm03019
]
CAL15_00695
Enzymes [BR:
bgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CAL15_00695
Messenger RNA biogenesis [BR:
bgm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CAL15_00695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARP93024
UniProt:
A0A1W6Z860
LinkDB
All DBs
Position
complement(156986..158509)
Genome browser
AA seq
507 aa
AA seq
DB search
MNTTVSFADLGLVDTLLRAIAETGYTAPTPIQAQAIPQVLKGGDLLAAAQTGTGKTAGFT
LPILQRLSQTKPALKKPGRPRCLILTPTRELTAQVAESVQTYGKYTGLSAMVMFGGVNIN
PQITALKRPLDILVATPGRLLDHAGQKTIDLSGVEILVLDEADRMLDMGFIRDIRKVLAL
LPKQRQNLLFSATFSDEIRTLARGVLHDPGEVSVTPRNTATELVTQTMHLVAQSHKRDLV
SHLIRENGWHQVLVFTRTKHGANRLAEKLVKDGLSAAAIHGNKSQSARTRALSGFKDGSV
AVLVATDIAARGLDIDQLPLVINFELPNVPEDYVHRIGRTGRAGATGAAISLVDDSEIKL
LKAIERLISKTIERKPVTGWTPPARSAADEREDERDDDDRPRGGRRPQRSDGRPGQGAAG
RGGNGGRPGQGNAARGHGAGQGAGQGRPAQQPARAAQPRNGDRQPAGGDRRDAGRPQTAH
RTEGAPQRSGAPRPAGGNPRGGVLLGK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttgaataccactgtttcctttgccgacctcggactggtcgacacgctgttgcgcgccatc
gccgaaaccggctacaccgcgcccactcccatccaggctcaggccattccgcaagtgctc
aagggcggcgacctgctggccgccgcgcagaccggcacgggcaagaccgccggattcacg
ctgcccatcctgcaacgcctgtcgcagaccaagcccgcgctgaagaagcccggtcgcccc
cgctgcctgatcctgacccccacgcgcgaactgaccgcgcaggtggccgagtcggtgcag
acctacggcaagtacaccggcctgtcggccatggtgatgttcggcggcgtcaacatcaac
ccgcagatcacggcgctgaagaggccgctggacatcctggtggccacgcccggccgcctg
ctggaccacgccggccagaagaccatcgacctgtccggcgtcgagatcctggtactggac
gaagccgaccgcatgctggacatgggcttcatccgcgacatccgcaaagtcttggcgctg
ttgccgaagcagcgccagaacctgctgttctcggccacgttctcggacgagatccgtacg
ctggcgcgtggcgtgctgcacgacccgggcgaagtctcggtcacgccgcgcaacaccgcc
accgaactggtcacgcagaccatgcacctggtcgcccaatcgcacaagcgcgacctggtc
agccacctgatccgcgagaacggctggcatcaggtgctggtgttcacgcgcaccaagcac
ggcgccaaccgcctggccgagaagctggtcaaggacggcctgtcggccgccgccatccac
ggcaacaagagccagtcggcccgcacccgcgcgctgtcgggcttcaaggatggcagcgtc
gccgtgctcgtggccaccgacatcgccgcgcgcggcctggacatcgatcagctgccgctg
gtcatcaacttcgaactgcccaacgtgcccgaggactacgtgcaccgcatcggccgcacc
ggccgtgccggcgccacgggcgcggcgatctcgctggtggacgacagcgagatcaagctg
ctgaaggccatcgaacgcctgatcagcaagactatcgagcgcaagcccgtcacgggctgg
acgcccccggcgcgcagcgccgcggacgaacgcgaggacgagcgcgacgacgacgaccgt
ccgcgcggcggccgccgcccgcagcgttccgacggccgaccgggccagggcgcggcgggc
cgcggcggcaacggcggccgtcccggccagggcaatgccgcacgcggtcatggcgcaggc
cagggcgccggccagggccgcccggcgcagcagcccgcgcgcgccgcgcaaccacgcaac
ggcgaccgccagccggcgggaggcgaccgtcgggatgccggccgtccgcagacggcgcat
cgcaccgagggcgccccgcagcgcagcggcgcgccgcgtcctgcgggcggcaacccgcgt
ggcggcgtgctgctgggcaagtaa
DBGET
integrated database retrieval system
