Bordetella genomosp. 13: CAL15_09550
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Entry
CAL15_09550 CDS
T05441
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm03420
Nucleotide excision repair
bgm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAL15_09550
03430 Mismatch repair
CAL15_09550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgm03400
]
CAL15_09550
Enzymes [BR:
bgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAL15_09550
DNA repair and recombination proteins [BR:
bgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAL15_09550
MMR (mismatch excision repair)
Other MMR factors
CAL15_09550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ARP94610
UniProt:
A0A1W6ZBS5
LinkDB
All DBs
Position
complement(2117000..2119279)
Genome browser
AA seq
759 aa
AA seq
DB search
MMLDKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPYGLLAVTFTN
KAAREMLTRMTATLPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQTFQILDTADQLAAIK
RLLKANGIDDEKYPPRDVQRFINGCKEDGQRPGDVEVWDNDSHRRRLIDIYQLYEAQCQR
EGVVDFAELLLRAYELLTRNAPVREHYQRRFRHVLVDEFQDTNILQYKWLRLLAGGGAKI
FAVGDDDQSIYAFRGAHVGNMADFERDYAHGTVIRLEQNYRSYGNILDAANALISHNSAR
LGKNLWTEQGEGEPVRIVEQPSDGMEAQWLVDEVRALIHDGRARREIAVLYRSNAQSRVI
EHALFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPHDDTSWMRVVNFPTRGIGARTL
EQLADAAQSQGTSLYGAVATVGGKGGSNLAQFAQLIARLSEETRNLPLPELVEHMLDGSG
LIEHYKTEREGAERLENLNELITAATVFASEENYDGLPAGQVPQVAAQGDGDVVPVADGL
TPLAAFLSHAALEAGDNQAQVGQDAVQLMTVHSAKGLEFDVVFITGLEEGLFPHENSILE
QSGLEEERRLMYVAITRARERLYISLAQSRMLHGQTRYAMRSRFLDEIPEQHVKWITPRA
TLPSAQREAAWSAEWRGDAFGRKSTGTIAPRTPRGMSSGVTVGDKQFRIGQGVRHARFGD
GTIIGLSGSGQDAQAQIQFRDAGAKTLALGIAKLDIIQG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggataaactcaatcccgaacaacgcgccgccgttaccctcgaaccgcagcac
gccctggtcctggccggggcgggcagcggcaagacccgggtgctcaccacccggatggcc
tggctgattcaaacaggccaggccagcccatacgggctgctggccgtcaccttcaccaac
aaggccgcgcgcgagatgctcacgcgcatgacggccacgctgccgatcgatacccgcggc
ctgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgggcgcatcaccgcgat
gcaggcctgccgcagactttccagatactcgataccgccgaccagctggccgccatcaag
cgcctgctgaaggccaacggcatcgacgacgagaagtatccgccgcgcgacgtgcagcgt
ttcatcaacggctgcaaggaagacggccagcgtcctggcgacgtcgaggtgtgggacaac
gacagccaccgccggcgactgatcgacatctaccagctctacgaggcccagtgccagcgc
gaaggcgtggtcgacttcgccgagctgctgctgcgcgcctacgaactgctgacgcgcaat
gcgcccgtgcgcgaacactaccagcgacggttccgccacgtgctggtcgacgagttccag
gacaccaacatcctgcagtacaagtggctgcggctgctggcgggcggcggcgcgaagatc
ttcgccgtgggcgacgacgatcagtccatctacgcgttccgcggcgcgcatgtcggcaac
atggccgacttcgagcgcgactacgcgcatggcaccgtcatccggctggaacagaactac
cgctcgtacggcaacattctcgacgcggccaacgcgctcatctcgcacaacagcgcccgc
ctgggcaagaacctctggaccgaacagggcgagggcgagcccgtgcgcatcgtcgagcag
cccagcgacggcatggaagcccagtggctggtggacgaggtccgcgcgctgatccatgac
ggccgcgcgcgacgcgagatcgcggtgctctatcgcagcaacgcgcagtcgcgcgtcatc
gagcatgcgctgttctcggccggcattccgtacaaggtttacgggggcctgcgcttcttc
gagcgccaggaaatcaagcatgcgctggcctacctgcgcctgatggccaatccgcatgac
gacacgtcgtggatgcgcgtggtcaatttccccacgcgcggcataggcgcgcgcacgctc
gagcaactagccgacgcggcgcagtcgcaaggcaccagcctgtacggcgcggtggccacg
gtgggcggcaagggcgggtcgaacctggcccagttcgcgcagctcatcgctcgcctgtcc
gaagaaacgcgcaacctgccgctgcccgaactggtcgagcacatgctcgatggcagcggc
ctcatcgagcactacaagaccgaacgcgaaggcgccgagcgcctcgaaaacctcaatgaa
ctgatcaccgccgcgacggtgttcgcgtcggaagagaactacgacggcttgcccgcgggg
caggtgccccaggtcgcggcgcagggcgatggcgacgtggtgccggtggccgacggcctc
acgccgctggcggcgttcctgtcgcacgccgcgctcgaggccggcgacaaccaggcgcag
gtcggccaggacgccgtgcagctgatgacggtgcactcggccaagggcctggagttcgac
gtggtgttcatcaccggcctcgaggaaggcctgttcccgcacgagaacagcatcctcgaa
cagtccgggttggaagaagagcgccgcctgatgtatgtggccatcacgcgcgcgcgcgaa
cggctgtacatcagcctggcgcagagccgcatgctgcatgggcagacgcgatacgcgatg
cgctcgcgtttcctcgacgagatccccgaacagcacgtcaagtggatcacgccgcgcgcc
acgctgccgtcggcgcagcgcgaggccgcatggagcgcggagtggcgcggcgacgccttc
ggacgcaagtcgaccggaacgatcgcgccgcgtacgccgcgcggaatgtccagcggcgtc
acggtcggcgacaagcagttccgcatcgggcagggcgtgcggcacgcacgcttcggggat
ggcaccatcatcggcctgagcgggtcggggcaggatgcccaggcgcagatccagttccgc
gatgcgggggcgaagacgctggcgttggggatagccaagctggacatcatccaggggtga
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