Bordetella genomosp. 13: CAL15_10450
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Entry
CAL15_10450 CDS
T05441
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bgm
Bordetella genomosp. 13
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgm03016
]
CAL15_10450
Enzymes [BR:
bgm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CAL15_10450
Transfer RNA biogenesis [BR:
bgm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAL15_10450
Prokaryotic type
CAL15_10450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ARP94771
UniProt:
A0A1W6ZBP0
LinkDB
All DBs
Position
complement(2315536..2316276)
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AA seq
246 aa
AA seq
DB search
MAKRRGLALDGVLLLDKPVGLSSNHALQRAKRTVDAAKAGHTGTLDPFATGLLVCCMGRA
TKISGAMLDADKTYLATLQFGEETDSGDLTGIVTAQAGPDFTGVDEAVLRVVLSRFQGTI
EQIPPMYSALKRDGKPLYQYARAGIELDRPPRQVTIHRIELLECSGRQAVVEVACSKGTY
IRTLAQDIGRALGCFAHLAALRRTHAGPFSLDRAVTLEALQGLPDPKQALLGLNELPAGL
LPATRT
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacgacgcgggctcgcgctcgatggtgtgttgctgctcgacaagcccgtgggc
ctgtccagcaaccacgccctgcagcgcgccaaacgcacggtggacgcggccaaggccggc
cataccggtacgctcgaccccttcgccaccggcctgctggtgtgctgcatgggccgggcg
accaagatttccggcgccatgctggacgccgacaagacctacctcgccacgctgcagttc
ggcgaggaaaccgattccggcgacctgaccggcatcgtcaccgcccaggccgggcccgat
ttcacgggcgtggacgaggcggtgttgcgcgtcgtgttgtcacgtttccagggcaccatc
gagcagattccgccgatgtattctgccctgaagcgcgacggcaagccgctgtaccagtac
gcccgcgcgggcatcgaactcgatcgtccgccgcggcaggtcacgatccacaggatcgag
ctgctggagtgctccggccggcaggccgtggtcgaggtggcctgcagcaagggtacctac
atccggacgctggcccaggatatcgggcgcgcgctgggctgtttcgctcacctggcggcg
ctgcggcgcacgcacgccgggccattctccctggaccgcgccgtcacgctggaggccctg
caagggctgccggaccccaagcaggcactgcttggcttgaacgaattgccggcgggcctg
ctgcccgccactcgaacttaa
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