Bordetella genomosp. 13: CAL15_11145
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Entry
CAL15_11145 CDS
T05441
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm03030
DNA replication
bgm03430
Mismatch repair
bgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAL15_11145
03430 Mismatch repair
CAL15_11145
03440 Homologous recombination
CAL15_11145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgm03032
]
CAL15_11145
03400 DNA repair and recombination proteins [BR:
bgm03400
]
CAL15_11145
Enzymes [BR:
bgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAL15_11145
DNA replication proteins [BR:
bgm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAL15_11145
DNA repair and recombination proteins [BR:
bgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAL15_11145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ARP94882
UniProt:
A0A1W6ZCA5
LinkDB
All DBs
Position
complement(2458511..2462002)
Genome browser
AA seq
1163 aa
AA seq
DB search
MSDVAVSPPAFVHLRVHSEFSVVDGLVRIPDLIKRVAKLGQPAVALTDLANLFGLIKFYK
GARGAGVKPIAGCDAWLANDDDPDKPFRVLLLVRNHSGYLSLCELLTQAFLTNQSTGRAE
LRREWLQGRQGLIVLSGGRAGDVGQALEAGNAVSALSLARQWAHMFPGAYYIELQRAGLD
GDETYTQAAMRLAAEAGLPVVATHPVQFLDRDDFQAHEARVCIAEGQVLANPRRVRRFSP
DQYLLSSEEMAQRFADVPSALANSVEIARRCNLTLVLGKPRLPNFPTPEGVSLDDYLVQL
SEQGLEKRLAFLFPDEAERNAKREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNG
VPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVI
DYVKEKYGRDAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDQLSKLIPFNPADPWTLDR
TLKDEPAFKERYEQEEEVRGLVDLARPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPG
QENSAVSQYDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNESKRDFDIMALALDDQ
AAYRVLCEANTTAVFQLESRGMKELLKKLKPSNFEDIIAMLALYRPGPLESGMVEDFVNR
KHGRAQVDYFHPDLEGTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEE
MAKHRELFEKGAREKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALIAYQTAWLKAYHP
TEFLAATLSSDMDDTDKVQTFVRDAQANGVAVLPPDVNASGYRFEPVADEHTAKGKPPRT
MRYGLGAVKGTGQGAVEEILRARAADGPFQNLFDFCRRVDKHAVNRRTIEALIRAGAFDS
IEPNRAALLGSVGTAMEAAEQAARSANQVSLFGDDSSDVVASELAKVPPWNLHAKLTEEK
SALGYYFSGHLFDHWRDEVRRIVPMQLARVEPQRDLQWMCGVLAGVRVMMTRRGKMVFAV
LDDGTAQLEISIFNELYEKHRNRLREDQLLIVQGKVSNDDYSGGMRIVADQLYDLQLARE
ARARSLRVRLNGQADANRLHQMLNPFRAEPENGVPGVPVDIVYQKDDFQCTMRLGDEWRV
RMADTLLDNLAAWARPDGVEITY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgtcgccgtttcgccccccgccttcgtccacctgcgcgtccattccgagttc
tcggtggtggacggcctggtgcgcattcccgacctgatcaagcgcgtggccaagctcggc
cagccggccgtggcgctcaccgacctggccaacctcttcgggctgatcaagttctacaag
ggcgcgcgcggcgccggcgtcaagcccatcgcgggatgcgacgcctggctggccaacgac
gacgatcccgacaagcccttccgcgtcctgctgctggtgcgcaatcacagcggctacctc
agcctgtgcgagctgctcacgcaggctttcctcaccaaccagtccacgggccgcgccgag
ctgcgccgcgaatggctgcaaggacgccagggactgatcgtgctgtccggcggtcgcgcg
ggcgacgtcggccaggcgctcgaggccggcaacgccgtgtcggccctgtcgctggcgcgc
caatgggcccacatgttcccgggcgcgtactacatcgagctgcagcgcgcgggcctggat
ggcgacgagacctatacccaggcagccatgcgcctggccgccgaggccggcctgcccgtc
gtggccacgcatccggtgcagttcctcgaccgcgacgacttccaggcgcacgaggcgcgg
gtctgtatcgccgaaggacaggtgctggccaatccgcgccgggtgcggcgcttctcgccc
gaccaatacctgctcagctccgaagaaatggcgcagcgctttgccgacgtgccgtcggcg
ctggccaacagcgtcgagatcgcgcgccgctgcaacctgacgctggtgctgggcaagccc
aggctgcccaactttcccacgccggaaggcgtgtcgctggacgactatctcgtgcagctg
tccgagcagggcctggagaagcgcctggccttcctgttcccggacgaggccgagcgtaat
gccaagcgcgagcagtactacgaacgcctgcgctgggagtgcaagaccatcatccagatg
ggcttcccgggctacttcctcatcgttcaggacttcatcaactggggcaagaacaacggc
gtgccggtgggcccggggcggggctcgggcgccggctcgctggtggcctatgcgctgggc
atcaccgacctcgaccccatccgctacgacctgctcttcgaacgcttcctgaatcccgag
cgcgtgtcgatgcccgacttcgacatcgacttctgccaggacaaccgcgaacgcgtcatc
gactacgtgaaggagaaatacggccgcgacgccgtcagccagatcgccaccttcggcacg
ctgggcgccaaggccgtggtgcgggatgccggccgggtgctggacatgccctacatgttc
tgcgaccagctttccaagctcatcccgttcaatcccgccgatccctggacgctggaccgc
acgctgaaagacgaaccggcgttcaaggaacgctacgagcaggaagaggaagtgcgcggg
ctggtcgacctggcgcggccgctcgaaggcctgacccgcaacatcggcatgcacgcgggc
ggcgtgctcatcgccccgggcaagctcaccgacttctgcccgctgtactgccagccgggc
caggagaacagcgcggtctcgcagtacgacaaggacgacgtcgaggccgccggcctggtc
aagttcgacttcctgggcctgcgcaacctcaccattctcgattgggccgtgcgctacgtg
cgccagttcaacgaatcgaagcgcgacttcgacatcatggcgctggcgctggacgaccag
gccgcctaccgcgtgctgtgcgaggccaacaccaccgcggtgttccagctggaatcgcgc
ggcatgaaagagctgctgaagaagctcaagcccagcaacttcgaagacatcatcgccatg
ctggccctgtatcgcccggggccgctcgaatcgggcatggtggaagacttcgtcaaccgc
aagcacggccgcgcgcaggtggattacttccaccccgacctggaaggcaccctgaagagc
acctacggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcatcggcggc
tactcgctgggcggcgccgacctgctgcggcgcgccatgggcaagaaaaagcccgaggaa
atggccaagcaccgcgaactgttcgagaagggcgcgcgcgagaagggccatgatcccgac
ctggcggtcaagctgttcgacctgatggagaagttcgccgggtacggcttcaacaagtcg
cactcggccgcgtacgcgctcatcgcttaccagaccgcgtggctcaaggcctatcatccc
accgagttcctggccgccaccctgtcgtccgacatggacgacacggacaaggtgcagacc
ttcgtgcgcgacgcccaggccaacggcgtggcggtgcttccgcccgacgtcaacgcctcc
ggctatcgcttcgaaccggtggccgacgagcacaccgccaagggcaagccgcctcgcacc
atgcgctatgggctgggagcggtgaagggcacgggccagggggccgtcgaagagatcctg
cgcgcccgtgcggccgacgggcccttccagaacctgttcgatttctgccgccgcgtcgac
aagcacgcggtcaatcgccgcaccatcgaggcgctgatccgggccggcgccttcgacagc
atcgagcccaatcgagcagccctgctgggctcggtgggcaccgccatggaggcggccgag
caggcggcgcgcagcgccaaccaggtctcgctgttcggcgacgacagcagcgacgtggtc
gccagcgaactcgccaaggtgccgccctggaacctgcacgccaagctcaccgaggaaaag
agcgcgctgggctactacttcagcggccatctgttcgatcattggcgcgacgaagtgcgc
cgcatcgtgcccatgcagctggcgcgcgtcgagccgcagcgcgacctccaatggatgtgc
ggggtgctggccggcgtgcgcgtcatgatgactcgccgcggcaagatggtgttcgccgtg
ctggacgacggcaccgcccagctcgagatctccatcttcaacgagttgtacgaaaagcac
cgcaatcgcctgcgcgaagaccagctgctcattgttcagggcaaggtcagcaacgatgat
tactctggcggcatgcgcatcgtcgccgaccagctgtacgacctgcagctggcgcgcgaa
gcgcgggcgcgctcgctgcgggtccggctcaatggccaggccgatgcgaaccgcctgcac
cagatgctcaatcccttccgcgccgaacccgagaacggcgtgcccggcgtaccggtcgac
atcgtctaccaaaaggacgacttccaatgcacgatgcgcctcggcgatgagtggcgcgtg
cgtatggccgatacactgctggataacctggctgcgtgggccaggccggacggggtcgag
atcacgtactag
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integrated database retrieval system
