Bordetella genomosp. 13: CAL15_15725
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Entry
CAL15_15725 CDS
T05441
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CAL15_15725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgm03019
]
CAL15_15725
03009 Ribosome biogenesis [BR:
bgm03009
]
CAL15_15725
Messenger RNA biogenesis [BR:
bgm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CAL15_15725
Ribosome biogenesis [BR:
bgm03009
]
Eukaryotic type
Pre-60S particles
RNases
CAL15_15725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ARP95702
UniProt:
A0A1W6ZEK5
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All DBs
Position
complement(3511378..3511923)
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AA seq
181 aa
AA seq
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MAANENRLVWLDMEMTGLDPEKERIIEVAVVVTEPDLSVVAEGPVLVVHQPDSLLDAMDN
WNKSTHGKSGLIDKVRASTLTEAQAETELLAFLSQHVPAGKSPLCGNTISQDRRFMYAYM
PNLERFFHYRNLDVSTLKELARRWAPTVYKGFEKKSRHEALADIYESIDELKYYREHLLK
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaacgagaatcgcctggtctggctcgacatggaaatgacggggctcgatccc
gagaaggaacgcatcatcgaggtggccgtcgtcgtgacggagcccgacctgagcgtcgtg
gccgagggtccggtgctggtggtccaccagcccgacagcctgctggacgccatggacaac
tggaacaagtccacgcacggcaaaagcggcctgattgacaaagtcagggcgtccacgctt
accgaggcgcaggccgagaccgaactgctggccttcctgtcccagcacgtgccggccggc
aagtcgccgctgtgcggcaacaccatcagccaggaccggcgcttcatgtacgcgtacatg
cccaacctcgagcgctttttccactaccgcaacctggacgtcagcacgctgaaggaactg
gcgcgccgctgggcgcccacggtgtacaagggcttcgagaagaagagccggcacgaggcg
ctggccgacatctacgaatccatcgacgaactgaagtactaccgcgaacacctgctcaag
gtgtag
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