Bordetella genomosp. 13: CAL15_15940
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Entry
CAL15_15940 CDS
T05441
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bgm
Bordetella genomosp. 13
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgm03032
]
CAL15_15940
03036 Chromosome and associated proteins [BR:
bgm03036
]
CAL15_15940
03400 DNA repair and recombination proteins [BR:
bgm03400
]
CAL15_15940
DNA replication proteins [BR:
bgm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CAL15_15940
Chromosome and associated proteins [BR:
bgm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CAL15_15940
DNA repair and recombination proteins [BR:
bgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CAL15_15940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ARP95734
UniProt:
A0A1W6ZFW4
LinkDB
All DBs
Position
complement(3559327..3559692)
Genome browser
AA seq
121 aa
AA seq
DB search
MTKSELIAALAARYPQLAARDTDYAVKTMLDAMTQALASGQRIEIRGFGSFSLSQRSPRI
GRNPKSGEQVLVPGKQVPHFKAGKELRERVDLVASERDGTASAGTADSDPLPSALDLHAM
H
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagtcggagctgatcgccgcgctggcggcccgctatccacagttggccgcccgc
gacaccgactacgccgtcaagaccatgcttgacgcgatgacccaggccctggcctcgggt
cagcgcatcgagatccgcggttttggcagcttctcgttgtcgcaacggtctccccggatc
gggcgcaaccccaagtcgggcgaacaagtgctggtacctggcaaacaggtgccgcacttc
aaggccggcaaagaactgcgcgagcgcgtggatctggttgccagcgagcgggacggcacg
gccagtgcgggaacggcggactccgatccgctgccctcggcgctggacctccatgccatg
cactga
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