Bordetella genomosp. 13: CAL15_17420
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Entry
CAL15_17420 CDS
T05441
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
bgm
Bordetella genomosp. 13
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgm03400
]
CAL15_17420
DNA repair and recombination proteins [BR:
bgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CAL15_17420
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
VMAP-M12
Motif
Other DBs
NCBI-ProteinID:
ARP96000
UniProt:
A0A1W6ZFT6
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All DBs
Position
3902034..3902510
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AA seq
158 aa
AA seq
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MVDIVTKERRSKMMAGIRGKGTKPELLVRRMLTADGFRYRLHRRDLPGTPDVVMPGRKIA
IFVHGCFWHQHQGCRFAKFPTSNENFWRHKLDENKRRDLLALAALRDSGWRILTVWECAT
RTKDSNDSLGTRMRQWIESDCVLREIPSKIHAPDPQCR
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacattgtcaccaaagaacggcgcagcaagatgatggcagggattcgtggcaag
ggcacgaagccggagctgctcgtccgtcggatgctcactgctgacggttttcgctatcgt
ttgcatcggagagatcttccgggaacaccggacgttgtcatgcccggcaggaaaatagcg
atattcgtccatggatgtttctggcatcagcatcagggctgcaggtttgcgaagttcccg
acgagcaatgagaacttttggcggcacaagcttgatgagaacaaacgacgcgacctgctg
gcgctggccgccttgagagattccggatggcgcatcctcacggtatgggagtgtgcaaca
cgcaccaaagactccaacgactctctaggcacacggatgcgccagtggattgaaagcgac
tgcgtactcagggaaattccatcgaagattcatgctcccgacccacaatgtcgctga
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