Bordetella genomosp. 13: CAL15_18935
Help
Entry
CAL15_18935 CDS
T05441
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAL15_18935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgm03019
]
CAL15_18935
Enzymes [BR:
bgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CAL15_18935
Messenger RNA biogenesis [BR:
bgm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CAL15_18935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
LBP_BPI_CETP_C
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ARP96265
UniProt:
A0A1W6ZG82
LinkDB
All DBs
Position
complement(4203389..4204849)
Genome browser
AA seq
486 aa
AA seq
DB search
MIESTSTAAPAADAPSRTFADFALHPLLLQSIAETGYTTPTPIQAQAIPVVVEGRDVMGA
AQTGTGKTAAFTVPILHRLMPLANASASPARHPVRALILTPTRELADQVYESVKRYSKRT
PLRSAVVFGGVDIGPQKEALRQGCEVLVATPGRLLDHVEQKNVNLGQVGILVLDEADRML
DMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNSPVEIEVAARNATADTVSQ
IAYKMSGEAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIHGDKTQA
DRMKALDAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPHNSEDYVHRIGRTGRAGAT
GEAIALFTDAEERYLLDIEKLIKRPVPRGTLDVPADLVERSHGRGDRSDRERGDRDRGER
RERGERGARPARADRRPVDDFFLKPYEPSQSSSGPAEQNKESAPSSTPKRQLAALLGGSN
RKTSDS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatctacctctaccgcagcgcccgctgcagacgcgccttcgcgcacattcgcc
gatttcgcgctgcatccgctcctgctccagtccatcgccgagaccggctacaccaccccc
acgccgatccaggcccaggccatccccgtggtggtcgagggccgcgacgtcatgggcgcg
gcccagaccggcacgggcaagacggccgcgttcacggtgcccatcctgcatcggctgatg
ccgctggccaacgccagcgcctcgccagcgcgccatccggtgcgcgcgctcatactcacg
cccacgcgcgagctggccgaccaggtctatgaaagcgtcaagcgctacagcaagcgtacg
ccgctgcgctcggccgtggtgttcggcggcgtcgacatcggtccgcagaaagaagcgctg
cgccaaggttgcgaagtgctggtggccacgccgggccggctgctcgaccacgtcgagcag
aagaacgtgaacctcgggcaggtcggcatcctggtgctggacgaggcggaccgcatgctc
gacatgggcttcctgcccgatctcgagcgcatcatccggctgctgcccgcgcagcgccag
gggctgctgttctcggccaccttcagcaacgagatccgcaagctgggccgctcttacctg
aacagtccggtcgagatcgaagtcgcggcgcgcaacgccacggccgacacggtcagccag
atcgcctacaagatgtccggcgaagccaagcgggccgcggtggtgcacctggtgaagtcg
cgcggcctgaagcaggtcatcgtgttctccaacaccaagatcggcaccgcgcgcctggcg
cgccagctcgagcgcgacggcgtcaaggccgaatccatccacggcgacaagacgcaggct
gaccgcatgaaggcgctggacgccttcaaggccggcgacctcgaggtgctggtggccacc
gacgtggccgcgcgcggcctcgacgtggcgggcgtgccctgcgtcatcaactacgacctg
ccgcacaactccgaagactacgtgcatcgcatcgggcgtaccggccgcgccggcgccacc
ggcgaagccatcgcgctgttcaccgatgccgaagaacgctatctgctggacatcgagaag
ctgatcaagcggccggtgccgcgcggcacgctggacgtgccggccgacctggttgaacgc
agtcacggccgtggcgatcgttccgatcgcgaacgcggcgaccgcgatcgcggcgaacgt
cgcgaacgaggcgagcgcggcgcccgtcccgcgcgtgccgaccgccgtccggtggacgat
ttcttcctcaagccctacgagccttcgcagtcctcgtccggcccggccgagcagaacaag
gaaagcgcgccttcctccacccccaagcgccaattggccgcgctgctgggcggcagcaac
cgaaagacctcagattcgtga
DBGET
integrated database retrieval system
