Bordetella genomosp. 13: CAL15_19435
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Entry
CAL15_19435 CDS
T05441
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAL15_19435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgm03019
]
CAL15_19435
Enzymes [BR:
bgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CAL15_19435
Messenger RNA biogenesis [BR:
bgm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CAL15_19435
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
ARP96353
UniProt:
A0A1W6ZG16
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All DBs
Position
4322162..4323556
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AA seq
464 aa
AA seq
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MITTTIKKFVGRLFGPTVAGGPLRIERERHGIDRRNVSRNAIKVCDVLRQHGYEAYIVGG
AVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPA
SVDQKTDEHGRILSDNVFGTQAEDAARRDFTMNALYYDPHTEEVIDYHDGVQDLKKRQIR
MIGDPIKRYREDPVRMLRAVRFAAKLNGTIEPATRQPIRTMAGLVENVPASRLFDEMLKL
LTCGHAMDCLRQLRGEGLHHGLLPLLDVVLEQPGGENFVEQALERTDARVRAGKGISPSF
LFAALLWRLVDARWKQLRAEGEHTMPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQ
PRFERRQGKATYRMIEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANADDATRAEMIE
DTARLPREAGGDGPARKRRPRRRRRAGGGDGNAGGESSGAPDAA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaaccaccataaaaaaattcgtcggccgcctgttcgggcccaccgtcgccggc
ggccccctgcgcatcgagcgcgagcgccacggcatagaccggcgcaacgtatcgcgcaac
gccatcaaggtctgcgacgtactgcgccagcatggctacgaagcctacatcgtgggcggc
gcggtgcgcgacctgatcgtcggcctcgagcccaaggacttcgacgtggccaccaacgcc
acgcccgaacagatccgaccgctgttccgccgcgcacgcatcatcggccgccgcttccag
ctggtgcacgtggtgttcggccaggagatcatcgagacctccacgttccgcgccccggcc
agcgtggaccagaagacggatgagcacggccgcatcctcagcgacaatgtgttcggcacg
caggccgaggacgccgcgcggcgcgacttcaccatgaacgcgctttactacgatccgcac
accgaggaagtcatcgactaccacgacggcgtgcaagacctcaagaagcgccagatccgc
atgatcggcgatccgatcaagcgctatcgcgaagacccggtgcgcatgctgcgcgccgtg
cgcttcgccgccaagctcaacggcaccatcgagccggccacgcgccagccgatccgcacc
atggcagggctggtcgagaacgtgcccgcttcgcggctgttcgacgaaatgctcaagctg
ctgacctgcggacacgccatggactgcctgcgccagttgcgcggcgagggcctgcaccac
ggcctgctgccgctgctggacgtcgtgctcgaacagccgggcggcgagaacttcgtggaa
caggcgctggaacgcaccgacgcgcgcgtgcgggcgggcaagggcatcagccccagcttc
ctgttcgcggcgctgctgtggcgcctggtggacgcgcgctggaagcagttgcgcgccgaa
ggcgaacacaccatgcccgccctggtgcaggccgcggattcggtgctggacgaacagacc
gagaagctggccatccagcgccgcttctcgtcggacatgcgcgagatctggttcatgcag
ccgcgcttcgagcgccgccagggcaaggcgacctaccgcatgatcgagcagccgcgcttc
cgcgccgcctgcgacttcctgcagctgcgcgccgccgccggcgagttcgacagcgtgctg
gcgcaatggtggatggacctggccaatgccgacgacgcgacccgcgccgagatgatcgaa
gacaccgccaggctgcctcgcgaggccggcggcgatgggcccgcccgcaagcgccgtccc
cggcgccgccgtcgcgcgggcggcggtgatggcaatgccggcggcgaatcgtccggcgcg
ccggacgccgcatga
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