Bordetella genomosp. 13: CAL15_20360
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Entry
CAL15_20360 CDS
T05441
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bgm
Bordetella genomosp. 13
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bgm01011
]
CAL15_20360
Enzymes [BR:
bgm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CAL15_20360
Peptidoglycan biosynthesis and degradation proteins [BR:
bgm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CAL15_20360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
NMB0315_dom_I
LysM2_CERK1_LYK3_4_5
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
ARP96505
UniProt:
A0A1W6ZGW7
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All DBs
Position
4523690..4525126
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AA seq
478 aa
AA seq
DB search
MSLYRLLLPLILAALAGCAATTPTPQQAASAEASDPTPATRTDRYIARDTSRTVDLTHPP
RDAWDRIRRGFAVPNLDTDLARQWTEYYASHPEAVQRMAQRAGKYLYFIVDEINRRGLPT
ELALLPFVESAYNPTALSRAQASGLWQFVPATGQHFNLKQDWWRDERRDPIASTYAALDY
LEYLFEMQGDWYLALASYNWGEGSVQRAMARNESAGRATDYLSLDMPEETRNYVPKLQAI
KNIIANPQKYAVALPPVENTPYFAMVGKQRDIDLEVAAKLAEMPLDEFKALNPSFNRPVI
RGEHAATLLLPANRVAVFNANLAKYKGKLSTWSVYEARRGDTLATVAKRFGVPEARLRDI
NDLSRRGKLVAGQHLLVPTAGSEGGIQLASLSPSPGALDDALDDAPAAGGATAAPRARPG
RGPQPNVRTHKVRSGDTLYSIARAYGTSVNTLRALNNLKGNNLKVGSQLRIPGTAARG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttaccgactcctcctccccctgattctcgcggcgctggccggttgcgccgcc
accacgcccacgccgcaacaggccgcgtcggccgaggcttccgaccctactcccgcaacg
cgcaccgaccgctacatcgcccgcgacacctcgcgcacggtcgacctcacccatcccccg
cgcgacgcctgggaccgcatccgccgcggcttcgcggttcccaatctcgacaccgacctg
gcgcgccaatggaccgagtactacgcctcgcatcccgaggcggtccagcgcatggcgcag
cgtgccggcaagtacctgtatttcatcgtcgacgagatcaaccgccgcggcctgcccacc
gagctggcgctgctgcccttcgtcgaaagcgcctacaaccccaccgcgctgtcgcgcgcc
caggcctcgggcctgtggcagttcgtgcccgccaccggacagcacttcaacctgaagcag
gactggtggcgcgacgagcgtcgcgaccccatcgcctcgacgtacgcggcgctggactac
ctggaatacctgttcgagatgcagggcgactggtacctggcgctggcctcgtacaactgg
ggcgagggctcggtgcagcgcgccatggccaggaacgagagcgccggccgggccaccgac
tacctgtcactggacatgcccgaggagacgcgcaactacgtgcccaagctgcaggccatc
aagaacatcatcgcgaatccgcagaagtacgccgtggcgctgccgcccgtcgagaacacg
ccgtacttcgccatggtgggcaagcagcgcgacatcgacctcgaagtcgcggccaagctg
gcagaaatgccgctggacgaattcaaggcgctaaacccgtcgttcaaccggcccgtgatc
cgcggcgagcacgcagccacgctgctgctgccggccaaccgcgtcgcggtgttcaacgcc
aacctcgccaagtacaagggcaagctcagcacctggtcggtctacgaggcccgccgcggc
gacacgctggccaccgtggccaagcgcttcggcgtgcccgaggcgcgcctgcgcgacatc
aacgacctgtcgcgccgcggcaagctggtggccgggcagcacctgctggtgccgacggcg
ggctccgaaggcggcatccagctggcctcgctgtcgccttcgcccggcgcgctggatgac
gcactcgatgacgcgcccgccgccggcggcgccaccgccgcgccgcgggcccgtcccggg
cgcggcccccagcccaacgtgcgcacgcacaaggtgcgttcgggcgacacgctgtactcc
atcgcacgcgcgtacggcaccagcgtcaacaccctgcgcgccctcaacaacctgaagggc
aacaacctcaaggtgggttcgcaactgcgcatcccgggcaccgccgcccgcggctga
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