Bordetella genomosp. 13: CAL15_20990
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Entry
CAL15_20990 CDS
T05441
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bgm
Bordetella genomosp. 13
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgm03016
]
CAL15_20990
Enzymes [BR:
bgm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CAL15_20990
Transfer RNA biogenesis [BR:
bgm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CAL15_20990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ARP96621
UniProt:
A0A1W6ZH35
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All DBs
Position
4659649..4661532
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AA seq
627 aa
AA seq
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MYVFYEDDGSFKAANIMSETDATLQVEAESGKRSKIKRNSTLFTFASPEPASLLAQAAAA
AEEIDLQFLWECAPQEEFDTPTLAAEYFGHAPTPVEHAALLMRLHGAPAYFHRRGSGRYR
PAPPDILAAALAAIEKKRLQAEQQQRWVDEMAQGRLPEAIAQAADSLLVRPDKNSQAWKA
LDAACAQLHKTPDRLLLELGAWPSALALHKRRFLAVHFPRGLDFPAVEVPPIARDLPLSD
AEIYSVDDVTTTEIDDALSVVELPDGRVRVGVHIAAPGLSVTRDSELDKLARARLSTVYM
PGDKIPMQPDSVIQAFSLDAGREVPALSLYVTADPATGEIAESETRLERIVVRENLRHNQ
LDTQITEEALSDPQADVPYAHWLRPLWRLAQALSARRDEVRGKPENNSRVEYSFYLDGSP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLNQHGVPGIYRSQQAGRVRMSTQS
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIATVDNGVSARLVAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWIKQQGLTRAVAHVLRDDLVRLAQAPLVTRVGGLPELER
GTAVEIDILGRDELALELDCRYVGPAA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgttttacgaagatgacggcagcttcaaggccgccaacatcatgtccgaaacg
gacgccaccttgcaggtcgaggcggaatccggcaagcgcagcaagatcaagcgcaacagc
acgctgttcactttcgcctcgcccgagccggcctcgctgctggcccaggcggccgcggct
gccgaagagatagacctgcagttcctgtgggaatgcgccccgcaggaggaattcgacacg
ccgacgttggctgccgagtatttcggccacgcgcccactccggtcgaacacgccgcattg
ttgatgcgcctgcacggcgcgccggcgtacttccaccggcgcggcagcggccgctatcgc
cccgctccgccggacatcctggcggccgccctggccgctatcgagaagaagcggctgcag
gccgaacagcagcagcgctgggtcgacgagatggcgcagggcaggcttcccgaggccatc
gcgcaggccgccgactcgctgctggtgcgccccgacaagaactcgcaggcctggaaggcg
ctggacgccgcctgcgcgcaactgcacaagacgcccgaccgcctgctgctcgaactgggt
gcgtggcccagcgcactggccctgcacaagcgccgcttcctggcggtgcacttcccgcgc
ggcctggacttccccgctgtggaggtgccgcccatcgcccgcgacctgccgctgtccgac
gcggagatctattcggtggacgacgtgaccaccaccgagatcgacgacgcgctgtcggtg
gtcgaactgcccgacggccgcgtgcgcgtcggcgtgcacatcgccgcaccgggcctgtcg
gtgacgcgcgacagcgagctggacaagctggcgcgcgcccggctgtccaccgtgtacatg
cccggggacaagatccccatgcagcccgacagcgtcatccaggctttctcgctggacgcc
ggccgcgaagtgccggcgctgtcgctgtacgtgaccgccgacccggccaccggcgagatc
gccgaatccgaaaccaggctggaacgcatcgtggtgcgcgagaacctgcgccacaaccag
ctcgacacgcagatcaccgaagaggccctgtccgacccgcaggccgacgtgccgtacgcg
cactggctccgaccgctgtggcggctggcgcaggccctgtcggccaggcgcgacgaagtg
cgcggcaagcccgagaacaacagccgcgtcgagtacagcttctatctggacggcagtccc
gacgacccggacactccggtgcgcctggttccgcgccagcgcaatgcgccgctggaccgc
atggtcgccgagtacatgatcctggccaacaacctgtggggcggcctgctgaaccagcat
ggcgtgccgggcatctaccggtcgcagcaggcaggccgcgtgcgcatgagcacgcagtcg
ctgccgcacgaggccatcggcgtgccgcagtacgcctggagcacgtcgccgctgcggcgc
tacgtcgacctggtgaaccagtggcaactgatcgccaccgtcgacaacggcgtatcggcg
cgcctggtggcgcccttcaagccgcgcgacgccgacctgttcgccatcatcggcgccttc
gatgcgcagtacgcggcctgggcggaattccagagcgccatggaacgctactggtgcctg
cgctggatcaagcagcagggcctgacccgcgcggtggcgcacgtgctgcgcgacgacctg
gtgcgcctggcccaggcgccgctggtcacgcgggtgggcgggctgcccgaactcgagcgc
ggcacggcggtggagatcgacatccttggccgcgacgaactggccttggaactggattgc
cgctacgtcggcccggcggcctga
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