Bordetella genomosp. 13: CAL15_23370
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Entry
CAL15_23370 CDS
T05441
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm00300
Lysine biosynthesis
bgm00470
D-Amino acid metabolism
bgm01100
Metabolic pathways
bgm01110
Biosynthesis of secondary metabolites
bgm01120
Microbial metabolism in diverse environments
bgm01230
Biosynthesis of amino acids
Module
bgm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CAL15_23370
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CAL15_23370
Enzymes [BR:
bgm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CAL15_23370
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ARP97055
UniProt:
A0A1W6ZIH9
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All DBs
Position
5187250..5188545
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AA seq
431 aa
AA seq
DB search
MNAPASTTRPELAGHPHFHYRDGVLHAEGVALDKLAAELGTPLYVYSRAALAAALGSYRD
AIGDRPVLVCFGMKANSNLAVLKEFARLGAGFDIVSGGELQRVLAVGGDPSRVVFSGVGK
QAWEMRAAIEAGVMCFNVESQAELRRLSQVAHEMGQTARVSLRVNPDVDAQTHPYISTGL
KENKFGIAIESALDAYRLAASLPGLEVVGVDCHIGSQLTDISPYFDALEKLLDLISQLAE
EGITISHLDLGGGLGIRYTDEIPPSPKALLDGVFARLQARGLGHLHLVLEPGRSLVGNAG
LLLTTVQYLKHAEARNFAIVDAAMNDLLRPSLYEAYHGLRAVRPRQGDEQEYDVVGPVCE
SGDWLARQRRLSVQEGDVLALESAGAYGMVMASNYNSRGRPAEVMVDGDKYYVVRQRETL
ADLIRGESTLP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccgcctccacgacccggcccgaactggccggtcatccgcattttcattac
cgcgacggcgtgctgcacgcagaaggcgtggcgctggacaagctggccgccgaactgggc
accccgctgtacgtgtactcgcgcgccgcgctggccgccgcgctgggctcgtatcgcgac
gccatcggcgatcgccccgtgctggtctgcttcggcatgaaggccaattccaacctggcg
gtgctgaaagaattcgcgcggctcggcgcgggcttcgacattgtgtcgggcggcgagctg
cagcgcgtgctggccgtgggcggcgatccctcccgcgtggtgttctcgggcgtgggcaag
caggcctgggagatgcgtgccgccatcgaggcgggcgtcatgtgcttcaacgtcgaatcg
caggccgaactgcgccgcctgtcgcaggtggcgcacgaaatgggccagaccgcgcgcgtg
tcgctgcgcgtgaatcccgacgtggacgcgcagacgcacccgtacatctccaccggcctg
aaggaaaacaagttcggcatcgccatcgagtcggcgctggacgcctacaggctggccgcc
tcgctgcccggcctggaagtggtcggcgtcgactgccacatcggctcgcagcttaccgac
atcagcccctacttcgatgccttggaaaagctgctggacctgatcagccagctggccgag
gaaggcatcacgatttcgcacctcgacctgggcggcggcctgggcatccgctataccgac
gagattccgccctcgcccaaggcgctgctggacggcgtgttcgcccgcctgcaggcgcgc
ggcctgggccacctgcacctggtgctcgagcccggccggtcgctcgtgggcaatgccggc
ctgctgctgaccacggtgcaatacctgaagcacgccgaggcccgcaacttcgccatcgtg
gacgcggccatgaacgacctgctgcgcccctcgctgtacgaggcctatcacggcctgcgc
gcggtgcggccgcgccagggcgatgaacaagagtacgacgtggtcggccccgtatgcgaa
agcggcgactggctggcgcgccagcgccggttgtcggtgcaggaaggcgacgtgctggcg
ctggaatcggccggcgcctacggcatggtcatggccagcaactacaactcgcgcggccgc
ccggccgaggtgatggtggatggcgacaagtactacgtggtgcggcagcgcgaaacgctg
gcggacctgatccggggcgaatccacgctgccttga
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