Borreliella garinii NMJW1: BgCN_0258
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Entry
BgCN_0258 CDS
T02299
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bgn
Borreliella garinii NMJW1
Pathway
bgn03410
Base excision repair
bgn03430
Mismatch repair
bgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BgCN_0258
03430 Mismatch repair
BgCN_0258
03440 Homologous recombination
BgCN_0258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgn03400
]
BgCN_0258
DNA repair and recombination proteins [BR:
bgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BgCN_0258
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BgCN_0258
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BgCN_0258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
EF-hand_PLCG1
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-GeneID:
13812465
NCBI-ProteinID:
AFT83584
LinkDB
All DBs
Position
263057..265183
Genome browser
AA seq
708 aa
AA seq
DB search
MKIWKQKETNIQIQELTRIAKQYNINPFEATLLIKREIKEEDFIFFLEDSINLLHNPFLL
KDIDKFINRINKAIKDNENILIFGDKDADGITATIIMYETLKDFGLNVSYKIPSNGEFYG
LSKELINIALEKKISLIITVDNGISSIEEINYANSKGIEIIITDHHLPSEDFKTESIVIN
PHLKDDKYPFKEIAGCCVSFKTCLALSMSFTDLYSKNLVFLFLEKTNNEIILNAIEIKKY
ILKQYLRLNNKNDSSINLNKLEKFIQNKYIVIFNEEDQGQLLNKHFGISININTIDISEN
FIKKYPNFRKKTLKDLIQATKYFRYKEVEIKDKLYYIFYNIIFETNKNLLQKCLKRLSFV
AIGTIADNMPIINENRIILKAGLKEIALRERMSINYLLKDANILTKPNITSMDIAYKIAP
ILNSTGRLEKADIAINFLLADDINQIENKFKEIKEINELRKYKEEKAWNSHNKNTIFKND
KFIVCYDKNTPKGISSRLATRLSAYYQKVAIFLTKQDNIIKGSIRSNNKINSKALISTIP
SHLIINSGGHKAAAGFTLNENLLEDFIKELEYATTKVKYETTDENESILIDAIVPKNLTK
DSLFKTIEIFEPYGYEFREPILMMENVCLQELKTIDKNHSSKHINMRIKSQNDYYKAIFF
NGTKKIEELNIKENQYLDIIFTINEDFYCPRKKILKIIDIKKSAQINV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttggaaacaaaaagaaactaatatacaaatccaagaattaactcgcattgct
aagcaatataatataaatccctttgaagcaactttgctcataaagcgagaaatcaaagaa
gaagatttcatattttttcttgaagatagcataaatttactacacaatccattcttatta
aaagatatagataaatttataaacagaattaataaagcaattaaagataatgaaaacata
ttaatctttggagataaagatgctgatggaattacagcaacaataataatgtatgagact
cttaaagattttggacttaatgtaagttataaaataccttcaaatggagaattttatgga
ctttcaaaagaattaatcaacatagctttagaaaaaaaaatctctttaataataaccgtt
gataatggtatctctagtattgaagaaataaattatgcaaattcaaaaggaatagaaata
ataatcacagatcaccatcttccaagcgaagattttaaaactgaaagcatagttataaat
ccccacctaaaagatgataaatatccattcaaagaaatagcaggatgttgcgtaagtttt
aaaacttgccttgctcttagcatgtcctttacagatctttattctaaaaaccttgtattt
ttatttttagaaaaaacaaataatgaaattattcttaatgcaatagaaataaaaaaatat
attttaaaacaatatctaagattaaataacaaaaatgactcttcaattaacttaaacaaa
ctagaaaaatttatacaaaacaaatacatagtaatctttaacgaagaagatcaaggtcaa
ttattaaataaacacttcgggataagcataaatattaacacaattgatattagtgaaaat
tttataaaaaaatacccaaattttagaaaaaaaacattaaaagacttaattcaagcaact
aaatattttagatataaagaagttgagattaaagacaagctttactacatattttacaac
ataatttttgaaactaacaaaaatttgctccaaaaatgtctaaaaagacttagctttgtt
gcaataggaacaatagcagacaatatgcccattattaatgaaaacagaataatcctaaaa
gcagggcttaaagaaattgcactaagagaaagaatgtctattaattatctattaaaagat
gcaaacatattaacaaaaccaaatataacttcaatggatatcgcatataaaattgcacca
atactaaactcaacaggaagacttgaaaaagcagatattgcaataaattttttactagct
gacgacattaatcaaatagaaaataaatttaaagaaataaaagaaatcaacgaactaaga
aaatataaagaagaaaaagcttggaattctcataataaaaatactatttttaaaaatgat
aaattcatagtttgttatgataaaaacaccccaaaaggaataagttcaagacttgcaact
agactttctgcttactaccaaaaagttgctatttttttaacaaaacaagataatattatt
aaaggatcaattaggtcaaacaataaaatcaattcaaaagcattaatatcgacaatacct
tctcatttaataataaattcaggggggcataaagctgccgctggatttacgctaaatgaa
aatttactcgaagactttattaaagaattagaatatgcaactacaaaagttaaatatgaa
actactgatgaaaacgagtcaatattaatagatgctattgttccaaagaatttaacaaaa
gattctctttttaaaacaatagaaatatttgaaccttatggctatgaatttagagagcca
atattaatgatggaaaatgtttgccttcaagaactcaaaacaattgacaaaaatcatagc
tcaaaacatataaatatgcgcattaaatcacaaaacgactactataaagctatttttttt
aacggaacaaaaaaaatagaagaattaaatataaaagaaaatcaatatttagacatcatt
tttacaatcaatgaagatttttactgcccgagaaaaaaaattttgaaaatcatagacata
aaaaagagcgctcaaatcaatgtatag
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