Borreliella garinii NMJW1: BgCN_0837
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Entry
BgCN_0837 CDS
T02299
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bgn
Borreliella garinii NMJW1
Pathway
bgn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BgCN_0837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgn03019
]
BgCN_0837
03016 Transfer RNA biogenesis [BR:
bgn03016
]
BgCN_0837
Enzymes [BR:
bgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BgCN_0837
Messenger RNA biogenesis [BR:
bgn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BgCN_0837
Transfer RNA biogenesis [BR:
bgn03016
]
Prokaryotic type
tRNA degradation factors
BgCN_0837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KhpA-B_KH
Motif
Other DBs
NCBI-GeneID:
13813025
NCBI-ProteinID:
AFT84114
LinkDB
All DBs
Position
848210..850333
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AA seq
707 aa
AA seq
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MFETGFMAKQANGSVLATYGGSSVLATVCCSNNVREDLDFVPLSVEYNEKYYAAGKIPGG
FIKREGKPKDKEILVSRLIDRPMRPLFDKRFGREIQVIPTTLATDQLNPPDIVGMNAAFT
AVFLSDIPFNGPIAAVRMVYLNGKFIVNPSFEEIHDSDLDIVVAGSLNGITMVEGGANEV
SEDILLSAIDGAHEYIKQICNAQKEFLDIVGEKEKLPLAFEEKIFEFKEELKDFIYTDLK
EACFVKGKLNRDKAITVLRNKSYEHFSSLEKLTDSNESLFYKAFDDFEREIVRNSILNDK
IRTDGRTPNEIRDIIAEVDILSRTHGSALFTRGETQALAVTTLGTSIDEQIMDDIDGDKR
LNFMLHYNFPPFSVGETGRLMTGRREIGHGHLAQRALESMVPGKNDFPYTIRVVSEILES
NGSSSMATVCAGSMSLMSAGVPVKRQVAGIAMGLISEGDKYVVLSDILGEEDHLGDMDFK
VAGTKNGITGFQMDIKIENVTKHLMRDALEQARIGRMHILSVMDTVISDSRVGISKYAPK
IVQLQIDIDKISLVIGSTGKTVKAITDEFEVKVQIEQNGKIILFGDDDFKMQKAKERIES
IVREPKVGEIYEGIVKKINSFGAFIELTPTKEGFLSTRLKSRDNKYGSGRFGTGNRYSRF
GGGDNIRGNVGLVRPPKLEEGQQIKVKIIDIDKFGKIDLEVVRDKDY
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagacgggatttatggctaaacaggctaatggatcagttcttgcaacttatgga
ggatcttcagttcttgcgactgtttgttgttcaaacaatgttagagaagatttagatttt
gttccactttctgttgagtataatgagaaatattatgcagccggcaagattccaggagga
tttattaaaagagaaggaaagccaaaggataaagaaatacttgtttctaggttaatagat
agaccaatgagacctctttttgataaaagatttggtcgagaaattcaagtaattcctacg
accttagctacagatcagctcaatcctcctgatattgttggaatgaatgctgcttttacg
gcagtttttttatcagatattccgtttaatggtccaattgcagctgttaggatggtttat
ttaaatggtaagtttatagtaaatccttcttttgaagagattcatgattccgatcttgat
attgttgttgcgggaagtttaaatggaattacaatggtagaaggtggtgctaatgaggtt
agtgaggatattttactgtcagcaatagacggtgcacatgaatatattaaacaaatttgc
aatgctcaaaaagaatttttagatattgtaggggagaaggaaaaacttcctttagctttt
gaagaaaaaatatttgaatttaaagaggagcttaaggattttatttatactgatcttaaa
gaggcctgttttgttaagggaaagcttaatagagataaggctataactgtactgcgaaat
aaatcttatgagcatttttcttctcttgagaaattgactgatagtaatgagtctcttttt
tataaagcttttgatgattttgagagagagattgttagaaattctattcttaacgataaa
attagaacagatggtcgaactcctaatgagataagagatattattgcagaagttgatatt
ttgagtagaacgcatggatctgcgctttttacaagaggagagacacaggctttagcagta
actactcttggcacaagcattgatgagcaaataatggatgatattgatggcgacaagcgt
cttaattttatgcttcattacaattttcccccattttcagttggtgagaccggtaggctc
atgactggtaggcgtgagattggtcatggtcatttagcccaaagagctttagaatcaatg
gttcctggaaaaaacgattttccgtatactattagggtagtttctgaaattttggagtct
aacgggtcttcttcaatggctactgtttgtgctggaagcatgtctttaatgtctgcagga
gttcctgttaaaagacaagttgcaggaatagccatggggcttattagtgaaggggataaa
tatgtagttttgagtgatattcttggagaagaggatcatttaggtgatatggactttaaa
gtggctggtacaaaaaatggaatcactggatttcaaatggatattaaaattgaaaatgtt
actaagcatttaatgagggatgctcttgagcaggcaagaataggtaggatgcacatactt
tctgttatggatactgtcatttcagattcaagagttggtatatctaagtatgctcccaaa
attgttcaactgcaaattgatattgacaagatatctcttgtaataggatctactggaaaa
actgttaaggctataacagatgaatttgaagttaaagttcaaattgagcaaaatggtaaa
attattcttttcggtgatgatgattttaagatgcaaaaggctaaagaaagaatagagagt
attgtaagggaaccaaaggtaggtgaaatttatgaaggaatcgttaaaaagattaatagc
tttggagcttttattgaacttactcctacaaaggaaggatttttaagtactcgcttgaaa
tctagagacaataagtatggttctggaagatttgggactggcaatagatattccagattt
ggtggtggagataatataagaggtaatgtagggttggttcgtcctccaaaattagaagaa
ggtcagcaaattaaagttaaaataattgatatagataaatttggaaaaattgatcttgaa
gttgttagagataaagattattaa
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