Burkholderia gladioli ATCC 10248: BM43_2299
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Entry
BM43_2299 CDS
T03826
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bgo
Burkholderia gladioli ATCC 10248
Pathway
bgo03030
DNA replication
bgo03430
Mismatch repair
bgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BM43_2299
03430 Mismatch repair
BM43_2299
03440 Homologous recombination
BM43_2299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgo03032
]
BM43_2299
03400 DNA repair and recombination proteins [BR:
bgo03400
]
BM43_2299
Enzymes [BR:
bgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BM43_2299
DNA replication proteins [BR:
bgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BM43_2299
DNA repair and recombination proteins [BR:
bgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BM43_2299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
AJX00158
UniProt:
A0AAW3EQT6
LinkDB
All DBs
Position
1:2492985..2494151
Genome browser
AA seq
388 aa
AA seq
DB search
MLDSSSSYPAIDGPLAFVDLETTGGSAADHRITEIGVVEVGPQGVSTWTSLIDPQQPIPA
FIQQLTGISDEMVRGAPTFASIAAELFARLEGRLFIAHNASFDRGFLRAEFERAGFAFNP
DMLCTVRLSRALFPRESRHGLDALIERHALVPNARHRALADADLVWQFWQRLPSLVPPER
LDEQIALTTRRFRLTGDLTEDDLERAPAGFGAYALFGEGDAPLFVGRSVRVRNRLRALLG
GERRSARERRLAEQVRRVEWRETGGELGAMLAETAWIAELSPAFNRKAGSKAADARRGLS
SAGTPWPFDGPVAIVEGGERAVYHVIDRWRYLGTTPDLSKAAALAAASSAGDDPFNASLC
RILQTHLARGLATVLLAPSAAAVASVDD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattcgtcctcgtcataccccgccatcgacggcccgctcgccttcgtcgatctc
gaaacgaccggcggatccgccgccgatcaccggatcaccgagatcggcgtggtcgaggtc
gggccgcaaggggtgtccacctggacctcgctgatcgatccccagcagccgatccccgcc
ttcatccagcagctcaccggcatcagcgacgagatggtgcgtggcgcgcccactttcgcc
tcgatcgcggccgagctgttcgcgcggctcgagggcaggctcttcatcgcccacaacgcc
agcttcgatcgcggtttcctgcgcgcggagttcgagcgggccggattcgccttcaatccc
gacatgctctgcaccgtgcgcctgtcgcgcgcgctgtttccgcgcgagtcgcgccacggg
ctcgacgcgctgatcgagcggcatgcgctggtgccgaatgcgcgccatcgcgcactggcc
gatgcggacctggtctggcagttctggcagcgcctgccgtcgttggtgccgcccgagcgg
ctcgacgaacagatcgcgctgaccacgcggcgtttccgcctgacgggcgacctgaccgag
gacgatctcgagcgggcgccggccggcttcggtgcctacgcgctgttcggcgagggggat
gcgcccttgttcgtcgggcgcagcgtgcgcgtgcgcaaccgcctgcgcgcgttgctgggc
ggcgagcggcgttcggccagggagcggcggctcgccgagcaggtgcggcgcgtcgaatgg
cgtgaaacgggaggagagctgggcgcaatgctggcggagacggcctggatcgccgaactg
tcgccggccttcaatcgcaaggcgggcagcaaggccgccgacgcccgccgcggcttgagc
tcggcgggcacgccctggccgttcgacgggccggtcgcgatcgtcgagggcggcgagcgc
gccgtctatcatgtgatcgaccgctggcgttatctcggtacgaccccggatctgtcgaag
gcagcggcgctggcggcggcgtcttccgccggcgacgatcccttcaacgccagcctgtgc
cggatcctgcagacgcacctggcgcgcggcctggcgacggtgctcctggcgccgagcgcg
gcggccgtcgcatcggtcgacgattag
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