Burkholderia gladioli ATCC 10248: BM43_2514
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Entry
BM43_2514 CDS
T03826
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bgo
Burkholderia gladioli ATCC 10248
Pathway
bgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BM43_2514 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgo03400
]
BM43_2514 (recB)
Enzymes [BR:
bgo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BM43_2514 (recB)
DNA repair and recombination proteins [BR:
bgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BM43_2514 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AJX00393
LinkDB
All DBs
Position
1:2732288..2736043
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AA seq
1251 aa
AA seq
DB search
MSTAIAASQAPQELDVFACALDGVNQIEASAGTGKTWNICALYVRLLLEHDLQADQILVV
TFTKAATAELHERIRGRLAQLAHALETGDDGGDPFVARLFETTLGEGSDGGGDDDGSGID
AETAAKRIRRALRGFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDAVLRFELAAE
FWRTRVEPVAAAHPGFAAWLVAHRAGPEALDAQLARRLKKPLAALRFDGLPDPHAQGVDF
DAALRASHAAAAALWQAERAAIAGVLELAQASLNQRSHKPEAVADALAAWGAYFNEAAGA
LAPAALPKPALKLTRGVLEKATKKGGATPEHPFFEAAEALEAALAAAEAAQRARWLALIA
DWLAEAPARLAEKKRTRRVVSFDDLIANLYHALEAHPWLADTLRRRYPAALIDEFQDTDP
LQFAIFDRIFAPAGPLFLVGDPKQAIYSFRAADLHTYLAARERAGARYTLAVNQRSTPAI
VEACNRVFGANPRAFVLDGLDYQPVRAGTRQRAPFVDGTDPRAGSGDFRIWMLPDGDQAL
GKRDAQWQAAQACAAEIARLMRGAREGAVRLGEAALTPADIAVLVQTHRQGSIVKRVLAA
WGIGSVELAQASVFATLDAEQLERVLAAIDAPGDLRRLRAALATDWFGLDAAALWRLEQG
EAAPGAAADDADAMSWVERFSRYRLLWRERGFAVMWRSFARELRIAERLIGGADGERRVT
DINHLAELTQARASAQPGIAPTLRWLAAQRAVGGGEDAQLRLESDRNLVQIVTVHKSKGL
EYAVVFCPFLNDGRLHEPREDALPDAREYHDEAGAAVLHYGCDEAAAELAATQARREQAA
ERARLVYVALTRAVHRCYLVAGVYQSARSTREARRSVLNWLVGGAGHGFDTWLETPPEAE
ELAASWRALATGPISIAPLPGVSARTPLAAGHDAERLGGARQAARFLRDAWRIASFSSLT
ASIAREQEGIAAVPDEALRPDHDALAAAVDPVPRIDGGGERAMQPNPDDIVGFPRGAAAG
ECLHLLFELSDFGDASGWDEAARRALHERPVEAEPELAKRLPAMMTRMLAEVVATELVPG
MQLAAIDPGRRLNEMEFLFPAAALDFAALRALLVEHGYPDVALESGTLAGFFKGFIDMIV
EHDGRFWIVDWKSNHLGATPDAYGPAALDAAMADHAYHLQALLYTVALHRYLRVRLPGYD
YDSHMAGYLYLFVRGVRPGWSSGGRPSGVHARRPSRELVEALDALMRKERA
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccatcgctgcctcgcaggcgccccaggagctcgacgtcttcgcctgcgcg
ctggacggggtgaaccagatcgaggcctcggccggcaccggcaagacctggaacatctgc
gcgctctatgtgcgcctgctgctcgaacacgacctgcaggccgaccagatcctggtggtg
accttcaccaaggccgccaccgccgagctgcacgagcggatccgaggacggctcgcgcag
ctcgcgcacgcgctggagaccggcgatgacggcggcgatccgtttgtcgcgcgcttgttc
gagaccacgctcggcgagggcagcgacggcggtggcgacgatgacggcagcggaatcgat
gccgaaaccgccgccaagcgaatccgccgcgcgctgcgcggcttcgaccaggcggcgatc
cacaccattcacgcgttctgccagcgcgcgttgcaggaagcgccgttcgcggccgccatg
ccgttcgccttcgagatggaggccgacgacgcggtgctgcgcttcgagctggcggccgag
ttctggcgcacgcgcgtcgagccggtggcggccgcgcatcccggcttcgcggcctggctg
gtcgcgcatcgcgccggaccggaagcgctcgacgcgcagctcgcgcggcgcctgaagaaa
ccgctggccgcgctgcgcttcgacggcctgcccgatccgcacgcgcagggcgtggatttc
gacgcggcgctgcgggccagccacgcggcggcggccgcgttgtggcaggccgagcgcgcg
gcgatcgccggcgtgctggagctggcgcaggcttccttgaaccagcgctcgcacaagccc
gaggcggtggccgacgcgctggccgcctggggcgcctatttcaacgaggcggccggcgcg
ctggcaccggccgccttgcccaagccggccctgaagctcacccgcggcgtgctggaaaag
gccaccaagaagggcggcgccacgcccgagcatccgttcttcgaggcggccgaggcgctg
gaggccgcgctggccgccgccgaggccgcgcagcgcgcgcgctggctggcgctgatcgcc
gactggctggccgaggcgccggcgcgtctcgccgagaagaagcgcacgcgccgcgtggtc
tccttcgacgacctgatcgccaacctgtatcacgcgctcgaggcgcatccctggctcgcc
gacacgctgcgccgccgctacccggccgcgctgatcgacgagttccaggacaccgacccg
ctgcagttcgcgatcttcgaccggatcttcgcgccggccgggccgctgttcctggtcggc
gatccgaagcaggcgatctacagcttccgcgcggccgacctgcacacctacctggccgcg
cgcgagcgggccggcgcgcgctacacgctggcggtgaaccagcgctcgacgccggccatc
gtcgaggcctgcaaccgcgtgttcggcgcgaacccgcgcgccttcgtgctggacggcctc
gactaccagccggtgcgcgccggcacgcggcagcgcgcgcccttcgtcgacggcaccgat
ccgcgcgccggcagcggcgatttccggatctggatgctgcccgacggcgaccaggcgctg
ggcaagcgcgacgcgcaatggcaggccgcgcaggcctgcgccgccgagattgcgcgcctg
atgcgcggcgcgcgcgagggcgcggtgcgactcggcgaggccgcgctcacgccggccgat
atcgccgtgctggtgcagacccaccggcagggcagcatcgtcaagcgcgtgctggccgcc
tgggggatcggcagcgtcgagctcgcgcaggcctcggtgttcgccacgctcgacgccgag
cagctcgagcgcgtgctggccgccatcgatgcgccgggcgacctgcgccggctgcgcgcg
gcgctcgccaccgactggttcgggctcgacgcggcggcgctgtggcggctggagcagggc
gaggcggcgcccggcgcggccgccgatgatgccgacgcgatgagctgggtcgagcgcttc
tcgcgctatcgcctgctctggcgcgaacgcggtttcgcggtgatgtggcgcagcttcgcg
cgcgagctgcggatcgccgagcggctgatcggcggcgccgacggcgagcggcgcgtgacc
gacatcaaccacctggccgagctgacccaggcgcgtgcctcggcgcagcccggtatcgcg
ccgacgctgcgctggctggccgcgcagcgtgcggtgggcggcggcgaggacgcgcaattg
cggctcgaatcggatcgcaacctggtgcagatcgtcaccgtgcacaagtccaagggcctc
gaatacgcggtggtgttctgtccgttcctgaacgatgggcgcttgcacgagccgcgcgag
gatgccctgcccgatgcgcgcgagtatcacgacgaggccggcgcggcggtgctccattac
ggctgcgacgaggcggccgccgagctggccgccacgcaggcgcgtcgcgagcaggcggcc
gaacgcgcgcggctggtctatgtcgcgctcacgcgcgcggtgcatcgctgctacctggtg
gcgggcgtctaccagtcggcgcgttcgacgcgcgaggcgcgccgcagcgtgctgaactgg
ctggtcggcggcgccggccacggcttcgacacctggctcgagacaccgcccgaggccgag
gaattggccgcgagctggcgtgcgttggccaccggcccgatctcgatcgcgccgctgccg
ggcgtgagcgcacgcacgccgctggcggccggccacgatgccgaacggctcggcggcgcg
cgccaggccgcgcgctttttgcgcgacgcctggcgcatcgccagcttcagctcgctgacg
gcctcgatcgcgcgcgagcaggaaggcatcgcggccgtgcccgacgaggcgctgcgtccc
gatcacgatgcgctcgccgccgccgttgatccggtgccgcgcatcgacggcggcggcgag
cgcgccatgcaacccaatcccgacgatatcgttggtttcccgcgcggcgcggcggccggc
gagtgcctgcacctgctgttcgagctgagcgacttcggcgacgccagcggctgggacgaa
gccgcgcggcgcgcgctgcacgagcggccggtggaagccgagcccgagctggccaagcgg
ctgccggcgatgatgacgcgcatgctggccgaggtggtcgccaccgagctggtgcccggc
atgcagctcgccgcgatcgatccgggccggcgcctgaacgagatggaattcctgttcccg
gccgccgcgctcgatttcgcggcgctgcgtgcgttgctggtcgagcacggctatcccgac
gtggcgctcgaatcgggtacgctcgcgggtttcttcaagggcttcatcgacatgatcgtc
gagcacgacggccgcttctggatcgtcgactggaagtcgaaccatcttggcgcgaccccc
gacgcctatgggccggccgcgctcgatgcggcgatggccgaccacgcctatcacctgcag
gcgctgctctataccgtcgcgctgcatcgctacctgcgcgtgcgcctgcccggctacgac
tacgacagccacatggccgggtatctctaccttttcgtgcgcggcgtgcgtcccggctgg
tcgagcggcgggcggccctcgggcgtgcatgcgcggcggccctcgcgcgagctggtcgag
gcgctcgacgcgctgatgcgcaaggagcgcgcatga
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