Burkholderia gladioli ATCC 10248: BM43_2709
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Entry
BM43_2709 CDS
T03826
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bgo
Burkholderia gladioli ATCC 10248
Pathway
bgo02020
Two-component system
bgo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BM43_2709 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BM43_2709 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgo03021
]
BM43_2709 (rpoN)
Transcription machinery [BR:
bgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BM43_2709 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_38
Gam
Motif
Other DBs
NCBI-ProteinID:
AJX00087
UniProt:
A0AAW3ER73
LinkDB
All DBs
Position
1:2954096..2955553
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AA seq
485 aa
AA seq
DB search
MPATLALQMRQHLTLTPRLQQSLRLLQLSSLEFQQELRQALDTNPFLEDVQISGDEDTRT
PFDEATQAAESAETTEPPTLIAAEAGPPDGEPSYTAEPSMRGSSLRRSGEAFDLEPSERL
VVEPSLHEHLHAALCLYPLNPRDRAAARTIIDALDDDGYLRQSLAELAETIADSENCFNE
QDLAIALRCVQSLDKPGLAARSLSECLTLQLAAMPAGRPDVECAKAIAEHHLERLARRET
AEIQRRLGCDTRTLRAACALVRKLDPRPGNHFGGASGDYVVPDVIVRQVSGRWVVTVNPA
VMPRARIHKLYAELFAKSSESTQSPLGQQLQEARWLIRNAQKRFDTIQRVGECIVARQRD
FFRYGAIALKPLVLRDIAEELDLHESTISRATGNKYMATPHGVFEFKHFFPRKLEAAGRG
ACSAAAAKVLIREMISTEPAGEPLSDVVLAQRLAGRGVVLARRTVTKYRQGMKILPAELR
RRVPI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcaacgctcgcgctacagatgcgacagcacctgacactgacgccgcgacttcaa
cagtcgctgcggctcttgcaactgtcgtcgctcgaattccagcaggaactgcgtcaagcg
ctggacaccaacccctttctcgaggacgtccagatttcgggcgacgaggacacgcgcacg
ccgttcgacgaggccacccaggcggccgagtcggcggaaaccaccgagccgccgaccctg
atcgcggccgaggcggggccgcccgacggcgagccctcatacaccgccgagccctcgatg
cgcggcagctcgctgcgccgctcgggcgaggcctttgatctcgagccttcggaacggctg
gtggtggagccttccttgcacgagcacctgcacgcggcgctttgcctgtacccgctcaat
ccgcgcgaccgcgcggcggcccgcaccatcatcgacgcgctcgacgacgacggttacctg
cgccagtcgctcgccgaactggccgagaccatcgccgactcggagaactgcttcaacgag
caggacctggcaatcgcgctgcgctgcgtgcagtcgctcgacaagccggggctggccgcg
cgttcgctgtcggaatgcctgacgctgcagctcgccgcgatgccggccgggcgccccgac
gtcgaatgcgccaaggcgatcgcggagcatcacctggagcggctcgcgcgccgcgagacc
gccgagatccagcgacgcctgggctgcgatacgcgcacgctgcgcgcggcctgcgcgctg
gtgcgcaagctcgatccgcgccccggcaaccatttcggcggcgcgagcggcgactacgtg
gtgccggacgtgatcgtgcgccaggtgagcggccgctgggtggtgacggtcaaccccgcg
gtgatgccgcgcgcgcggatccacaagctctatgccgagctgttcgccaagtccagcgag
tcgacccagtcgccgctggggcagcagttgcaggaagcgcgctggctgatccgcaacgcg
cagaagcgcttcgacacgatccagcgcgtgggcgagtgcatcgtcgcgcggcagcgcgat
ttcttccgctacggcgcgatcgcgctcaagccgctggtgctgcgcgatatcgccgaggag
ctcgacctgcacgaatcgaccatctcgcgcgccaccggcaacaagtacatggccaccccg
cacggcgtgttcgagttcaagcacttcttcccgcgcaagctcgaggcggcggggcgcggt
gcctgctcggcggcggcggccaaggtgctgatccgcgaaatgatctcgaccgagccggcc
ggcgagccgctctccgacgtggtgctggcgcagcgcctggccgggcgcggcgtggtgctg
gcacggcgcaccgtgaccaagtaccggcagggcatgaagatcctgccggccgagctgcgc
cggcgcgtgccgatctga
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