Burkholderia gladioli ATCC 10248: BM43_3681
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Entry
BM43_3681 CDS
T03826
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bgo
Burkholderia gladioli ATCC 10248
Pathway
bgo03030
DNA replication
bgo03430
Mismatch repair
bgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BM43_3681 (holB)
03430 Mismatch repair
BM43_3681 (holB)
03440 Homologous recombination
BM43_3681 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgo03032
]
BM43_3681 (holB)
03400 DNA repair and recombination proteins [BR:
bgo03400
]
BM43_3681 (holB)
Enzymes [BR:
bgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BM43_3681 (holB)
DNA replication proteins [BR:
bgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BM43_3681 (holB)
DNA repair and recombination proteins [BR:
bgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BM43_3681 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
AJW97990
UniProt:
A0AAP8S0Z5
LinkDB
All DBs
Position
1:complement(4113461..4114489)
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AA seq
342 aa
AA seq
DB search
MIYPWQTEDWDRLQALRAAWPHALLLHGQAGIGKLRFAQHLAQGFLCESPLPKGEPCGKC
AACTWFEQGNHPDYRIVLPEALAGEAPGAVADEPKADADEGGKKTRTPSKEIKIEQVRGL
LDFVGVGSHRGGARVVVLYPAEALNVAAANALLKTLEEPPSGVLFLLVSARLDRLLPTII
SRCRQWPMTLPSAADAEAWLAAQQVPDAAALLAEAGGAPLAALALAADENRPLRDWTLAQ
LAAGAGCDPFACGESLQKLPVPVVLGWLQRWLYDLLAQRAAGQPRYFPAQRAALERCAAA
LDANAFARFMKTVTRQRAVENHPLNARLVFEELFLGYRELYA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatctatccatggcaaaccgaggactgggaccgcctgcaggcgctgcgcgcggcctgg
ccgcacgcgctgctgctgcacggccaggccggcatcggcaagctgcgtttcgcccagcac
ctggcgcagggtttcctgtgcgaatcgccgctgcccaagggcgagccttgcggcaagtgc
gcggcctgtacctggttcgagcagggcaatcaccccgactaccggatcgtgctgcccgag
gcgctggccggcgaggctccgggcgcggttgccgacgagcccaaggctgacgcggacgag
ggcggcaagaagacccgcacgccgagcaaggaaatcaagatcgagcaggtgcgcggcctg
ctcgacttcgtcggcgtcggctcgcatcgcggcggcgcgcgcgtggtggtgctgtacccg
gccgaggcgctcaacgtggcggccgccaacgcgctgctcaagacgctcgaggaaccgccc
tcgggcgtgctgttcctgctggtgtcggcgcggctcgaccgcctgctgccgaccatcatc
agccgctgccggcaatggccgatgacgctgccctcggcggcggacgccgaggcctggctg
gcggcgcagcaggtgcccgacgcggcagccttgctggccgaagcgggcggcgcgccgctg
gccgcgctggcgctggccgccgacgagaaccggccgctgcgcgactggaccctggcgcag
ctggcggccggcgcgggctgcgatccgttcgcctgcggcgagtcgctgcagaagctgccg
gtgccggtggtgctgggctggctgcagcgctggctctatgatctgctggcgcagcgcgcg
gccggccagccgcgttatttccccgcgcagcgcgcggcgctcgaacgctgcgcggcggcg
ctcgacgccaacgccttcgcgcgtttcatgaagaccgtgacgcgccagcgcgcggtcgag
aaccacccgctcaatgcgcggctcgtgttcgaggagctgttcctcggctatcgcgagctc
tacgcatga
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