Burkholderia gladioli ATCC 10248: BM43_886
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Entry
BM43_886 CDS
T03826
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgo
Burkholderia gladioli ATCC 10248
Pathway
bgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM43_886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgo03019
]
BM43_886
Enzymes [BR:
bgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BM43_886
Messenger RNA biogenesis [BR:
bgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BM43_886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
CMS1
HI1480
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AJW97658
UniProt:
A0AAW3FAC6
LinkDB
All DBs
Position
1:959835..961337
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AA seq
500 aa
AA seq
DB search
MSFASLGLAEPLVRAVNELGYTEPTPIQTQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLNANAAAQAGGKRAVRALILTPTRELAAQVEESVRAYGKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDVSQLDILVLDEADRMLDMGFIHDIKRVLARLPA
KRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAETIAQKIYPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLGKDGISALAIHGNKSQSARTRALTEFKAGTLQVL
VATDIAARGIDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGANGEAVSLVCVDEKQLLRD
IEKLIKREIPQEVIAGFEPDPNAKPEPIQRRGQQQQRGGGGGGGARQPQGQGRGQGAARR
DGAQPGGAKPAAKPAAKAAPKPAAKPVKAGGGGGGAATAAKPRPAGGGRPGGGQGGNGGG
NANAGHANRNRSSRSGQRGH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgcttccctcggcctcgccgaacccctcgtgcgggccgtcaacgaactcggc
tataccgaaccgaccccgatccagacccaggcgatccccgccgtgctcggcggcggcgac
ctgctcgccggcgcccagaccggcaccggcaagaccgccggcttcacgctgccgatcctg
cagcgcctcaatgcgaatgccgccgcgcaggccggcggcaagcgcgccgtgcgcgcgctg
atcctcacgccgacgcgcgaactggccgcccaggtcgaggagagcgtgcgcgcctacggc
aagtacctgaagctgcgctcgaccgtgatgttcggcggcgtgagcatcaatccgcagatc
gacgcgctcaagcgcggcgtggacatcgtggtggcaacgccgggccgcctgctcgaccac
atgcagcagaagaccatcgatgtctcgcagctcgacatcctggtgctcgacgaagccgat
cgcatgctcgacatgggcttcatccacgacatcaagcgggtgctcgcgcgcctgcccgcc
aagcgccagaacctgctgttctcggccaccttctccgacgagatcaaggcgctggccgac
agcctgctcgactcgccggccctgatcgaggtggcgcgccgcaacaccacggccgagacc
atcgcgcagaagatctacccggtcgaccgtgaccgcaagcgcgagctgctcacccacctg
atccgcgagcacaactggttccaggtgctggtgttcacgcgcaccaagcacggcgccaac
cgcctggccgagcagctcggcaaggacggcatcagcgcgctggcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctgaccgagttcaaggccggcacgctgcaggtgctg
gtggccaccgatatcgccgcacgcggcatcgatatcgaccagttgccgcacgtggtcaac
tacgagctgccgaacgtgccggaagactacgtgcaccgcatcggccgaaccggccgcgcg
ggcgccaacggcgaggcggtctcgctggtctgcgtcgacgagaagcaactgctgcgcgac
atcgagaagctgatcaagcgcgagatcccgcaggaagtgatcgccggcttcgagcccgat
ccgaacgccaagccggaaccgatccagcgccgtggccagcaacagcagcgcgggggcggc
ggtggcggcggcgctcgccagccgcaaggccaggggcgggggcaaggcgcggcgcgccgt
gacggcgcccagccgggcggcgcgaagccggccgccaagccggcggcgaaagcggcgccc
aagcctgccgcgaagccggtcaaggccggcggtggtggcggcggcgccgcgaccgcggcc
aagccgcgtccggcaggcggcggccgaccgggcggtggccagggcggcaacggcggcggc
aatgccaatgcggggcacgcgaaccgcaaccgctcctcgcgcagcggccagcgcggccac
tga
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integrated database retrieval system
