Brevundimonas goettingensis: IFJ75_00040
Help
Entry
IFJ75_00040 CDS
T07668
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bgoe
Brevundimonas goettingensis
Pathway
bgoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IFJ75_00040 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgoe03019
]
IFJ75_00040 (recQ)
03400 DNA repair and recombination proteins [BR:
bgoe03400
]
IFJ75_00040 (recQ)
Enzymes [BR:
bgoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IFJ75_00040 (recQ)
Messenger RNA biogenesis [BR:
bgoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IFJ75_00040 (recQ)
DNA repair and recombination proteins [BR:
bgoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IFJ75_00040 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QTC91369
UniProt:
A0A975C2P8
LinkDB
All DBs
Position
complement(8662..10542)
Genome browser
AA seq
626 aa
AA seq
DB search
MPAESASLASPAPAGMEDARELLHRVWGHPDFRGLQADVVAEALAGRDVLAVLPTGGGKS
VCYQIPAILRPGLGLVVSPLIALMTDQVEALKQQGVAAARLDSGVSMDDRSAIWRAARAG
ELDLLYVSPEGLAQPHLIDRLHELPLSLIAIDEAHCVSQWGHDFRPDYRTLGKLAELFPG
VPRIAVTATADARTREDIVRSLRLDAAEVFVDSFARPNLQLSAVRKENASRARTDAAVID
LVRQRRGKSGVVYCGSRDGCDRVAQALRDAGTNAIAYHAGMGTDDRDRRLARFLAEEGAV
MVATIAFGMGVDKADVRFVIHADPPGSLEAYWQEIGRAGRDGEPAEGITLYGPSDIAWNL
RRLDSRPMPEEVKAVQVGKARRLFAMLDGAICRPQAVRRYFGETDAGVCGFCDICSDPPA
IYDATVQAQKALAAVQRLGGRFGRNRVIDHLLGKTKDVQPWESDLSTWGIGQDVSQNGWR
DIVDHLLFEGLLLEDPNDGKPLVGLGDPEAVRAVYRGERAIEVRRVPAASLTGRSEPRRA
RNDRNAAVEALDADVRARFETLRAWRRDRAAEQHVPPYVIFQDKTLLEIALVEPGSLDAL
GAVSGVGQSKLDRYGKELLEALRAAG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgaatccgccagtctcgcctcacctgctcccgcaggcatggaagacgcgcgc
gagctgctgcaccgcgtctggggccaccccgactttcgcggccttcaggccgatgtggtc
gccgaggccctggccgggcgcgacgtcctcgccgtcctgccgaccggcggcggcaagtcg
gtctgctatcagatcccggccatcctgcgccccggtctcggcctcgtggtctcgcccctg
atcgccctgatgaccgatcaggtcgaggcgctgaaacagcagggcgtcgccgccgcccgc
ctcgattccggcgtctccatggacgaccgttcggccatctggcgcgccgcgcgggcgggc
gaactggacctgctctacgtctcgcccgaaggcctggcccagccgcatctgatcgaccgg
ctgcacgaactgccgctcagcctcatcgccatcgacgaggcccactgcgtctcccagtgg
ggccacgacttccgtcccgactatcggacgctgggcaagctggccgaactcttcccgggc
gtgccgaggatcgccgtcaccgccaccgccgacgcccgcacgcgcgaggacatcgtccgc
tcgctccgcctcgacgcggccgaggtcttcgtcgacagtttcgcgcgcccgaacctgcag
ctctcggcggtgcgcaaggaaaacgcttcccgagcacgcaccgacgccgccgtcatcgat
ctggtgcgccaacggcgcggcaagtcgggggtcgtctactgcggctcgcgtgacggctgc
gaccgcgtcgcccaggccctgagggacgccggaaccaacgccatcgcctaccacgccggc
atgggcacggacgaccgcgaccgccgcctcgcccgcttcctcgccgaggaaggcgccgtc
atggtcgcgaccatcgccttcggcatgggggtcgacaaggccgacgtccgcttcgtcatc
cacgccgatccgcccggctcgctagaggcctattggcaggagatcggccgcgccggacgc
gacggcgaaccggccgagggcatcaccctctatggcccgtccgacatcgcctggaacctg
agacggctcgacagccgccccatgcctgaagaggtcaaggcggtgcaggtgggcaaggcg
cgccgcctgttcgccatgctggacggcgcgatctgccggccccaggccgtgcgtcgatac
ttcggcgagaccgacgcgggcgtctgcggcttttgcgatatctgcagcgacccgcctgcc
atctatgacgctaccgtccaggcccagaaggcgctcgccgccgtccagcgcctcggcggg
cgtttcggccgcaaccgcgtcatcgaccacctgctgggcaagacgaaagacgtccagccg
tgggagagcgacctctccacctggggcatcggtcaggacgtgtcgcagaacggctggcgc
gacatcgtcgaccatctgctgttcgagggcctgctgctggaagaccccaacgacggcaag
ccgctggtcggtctgggcgatcccgaggccgtccgcgccgtctatcgcggcgaacgcgcc
atcgaggtgcgccgcgtcccggccgcctccctgacgggccgatccgagcctcgccgcgcc
cgcaacgacaggaacgccgccgtcgaggccctggacgccgacgtccgcgcccgcttcgag
accctgcgcgcctggcgccgcgatcgcgccgccgaacagcacgtcccgccctatgtcatc
ttccaggacaagaccctgctcgagatcgccctcgtcgagcccggctcgctcgacgccctc
ggcgccgtctccggcgtcggccagtccaagctggaccgctatggcaaggaactgctcgag
gcgctcagggctgcgggttga
DBGET
integrated database retrieval system
