Brevundimonas goettingensis: IFJ75_00600
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Entry
IFJ75_00600 CDS
T07668
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bgoe
Brevundimonas goettingensis
Pathway
bgoe00521
Streptomycin biosynthesis
bgoe00523
Polyketide sugar unit biosynthesis
bgoe00525
Acarbose and validamycin biosynthesis
bgoe00541
Biosynthesis of various nucleotide sugars
bgoe01100
Metabolic pathways
bgoe01110
Biosynthesis of secondary metabolites
bgoe01250
Biosynthesis of nucleotide sugars
Module
bgoe_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bgoe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IFJ75_00600 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IFJ75_00600 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
IFJ75_00600 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IFJ75_00600 (rfbB)
00525 Acarbose and validamycin biosynthesis
IFJ75_00600 (rfbB)
Enzymes [BR:
bgoe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
IFJ75_00600 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
KR
Sacchrp_dh_NADP
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
QTC91470
UniProt:
A0A975C412
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All DBs
Position
123014..124072
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AA seq
352 aa
AA seq
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MRILVTGGAGFIGSALVRRLIEHTDHEVLVFDKLTYAGVLSSLEPVAASNRYSFVQADIC
DAEAVSKALSSFKPDVVAHLAAESHVDRSIDGPGAFIQTNMVGTFVMLNQTLGYWRGLPE
AEKAAFRFHHISTDEVFGSLGEDGFFTETTPYDPRSPYSASKAGSDHLVRAWGHTYGLPV
LVTNCSNNYGPYHFPEKLIPLIIIRALNGEPLPVYGDGSNVRDWLFVDDHARALQAVFET
GTPGETYNVGGNAERKNITVVTTICGILDRLRPRADGKAYADQITYVTDRPGHDHRYAID
ASKIRSDLDWTPSVTFEQGIETTVAWYLENQSWWQDILDARYSTQRLGVANG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattctggtcaccggcggcgccggcttcatcgggtcagccctggtccgtcgcctg
atcgaacacaccgaccacgaggtcctggtgttcgacaaactgacctatgccggcgtgctc
agctcgctggagccggtggcggccagcaaccgctacagcttcgtccaggccgacatctgc
gacgccgaggcggtgtcgaaggctctgtccagcttcaagcccgacgtggtcgcccacctg
gccgccgagagccacgtcgatcgttcgatcgacggccccggggccttcatccagacgaac
atggtcggcaccttcgtgatgctgaaccagacgctgggctactggcgcggcctgcccgag
gcggagaaggcggcgttccgcttccaccatatctcgaccgacgaggtgttcggctcactg
ggcgaggacggcttcttcaccgagacgacgccgtatgatccgcgctcgccctattcggcg
tccaaggccgggtccgaccacctggtccgcgcctggggtcacacctatggcctgccggtt
ctggtgaccaactgctcgaacaactacggcccctatcatttccccgagaagctgatcccg
ctgatcatcatccgtgcgctgaacggcgagcccctgccggtctatggcgacggctccaat
gtgcgcgactggctgttcgtcgatgatcacgcccgcgccctgcaggcggtgttcgagacc
ggcacgcccggcgagacctacaacgtcggcggcaatgccgagcgcaagaacatcacggtc
gtgaccaccatctgcggcatcctcgaccgcctgcgtccgcgggcggacggcaaggcctat
gccgaccagatcacctatgttaccgatcgtccgggccacgatcatcgctacgccatcgac
gcctccaagatccgctcggatctggactggaccccttcggtgaccttcgagcagggcatc
gaaacgacggtcgcctggtatctggagaaccagtcctggtggcaggacattctcgacgcc
cgttattcgacccagcgtctcggcgtcgcaaatggctga
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