Brevundimonas goettingensis: IFJ75_03340
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Entry
IFJ75_03340 CDS
T07668
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bgoe
Brevundimonas goettingensis
Brite
KEGG Orthology (KO) [BR:
bgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgoe03032
]
IFJ75_03340
03400 DNA repair and recombination proteins [BR:
bgoe03400
]
IFJ75_03340
Enzymes [BR:
bgoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IFJ75_03340
DNA replication proteins [BR:
bgoe03032
]
Prokaryotic type
DNA Topoisomerases
IFJ75_03340
DNA repair and recombination proteins [BR:
bgoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IFJ75_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
PCP_red
PB1
Motif
Other DBs
NCBI-ProteinID:
QTC91967
UniProt:
A0A975C336
LinkDB
All DBs
Position
complement(664214..665248)
Genome browser
AA seq
344 aa
AA seq
DB search
MPDGSISFIPAHELPHEVPKGLTYCSDENPGLSRSRSGTGFAYHDAKGALIRDKAVIDRI
RHLAIPPAWNNVWICPRATGHIQATGRDVKGRKQYRYHPDWSTARSETKFDRLPAFARAL
PKLRKRVEADLGKRGASRTKVLATAVRLLEITLIRVGNAQYAKQNRSYGLTTLNKRHLEV
DGAALTFEFRGKSGVDHKVSVRDRRLATVVRSLRELPGQHLFKYRSADGALCPITSDDVN
AYIREAMGDGFSAKDFRTWAGTVSAARALRDMDPATSPTDAKRRINVCVKAVSGLLGNTP
TVCRASYVHPAVFEAYVDGSLRKVLPGSQTAGFEKALVKLLTQA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacggttccatcagcttcatccctgctcacgaacttccccatgaggttccgaag
gggcttacgtattgcagcgacgagaaccccgggctgagccgaagccgcagcgggacgggc
tttgcctatcacgacgcgaaaggcgccctgatccgcgacaaggcggtgatcgaccggatc
aggcatctcgccatcccgcccgcctggaacaatgtctggatctgtccgcgcgccaccggc
cacatccaggcgaccggccgggatgtgaaggggcgcaaacagtaccgctatcaccccgac
tggagcacggcccggtccgagaccaagtttgaccgcctgcccgccttcgcacgcgccctg
cccaagttgcgcaaacgggtcgaggcggatctgggcaagcgcggcgcgagccggaccaag
gttctggccaccgccgtacgcctgctggagatcaccctgatccgcgtgggcaacgcccag
tatgcgaagcagaaccgctcctatggcctgaccaccctgaacaagcgccatctggaggtc
gacggcgccgccctgaccttcgagttccggggcaagagcggggtggatcacaaggtcagc
gtccgcgatcgacggctggccaccgtcgtccggtccctgcgcgaactgcccggccagcat
ctgttcaaataccggagcgccgacggcgccctgtgccccatcacctccgacgatgtgaac
gcctatatccgcgaggccatgggcgacggcttttcggccaaggatttccgcacctgggcc
gggacggtgtcggcggcgcgggccctgcgcgacatggatccggcgacctcgcccacagac
gccaagcgccggatcaacgtctgcgtgaaggcggtctcgggcctgctgggcaataccccc
accgtctgccgcgcctcctacgtccacccggcggtgttcgaggcctatgtcgatggctcg
ctgcgcaaggtcctgccgggatcgcagacggcgggcttcgaaaaggccctggtcaagctt
ctgacccaagcatga
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