Brevundimonas goettingensis: IFJ75_07035
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Entry
IFJ75_07035 CDS
T07668
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bgoe
Brevundimonas goettingensis
Pathway
bgoe03030
DNA replication
bgoe03430
Mismatch repair
bgoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IFJ75_07035 (dnaE)
03430 Mismatch repair
IFJ75_07035 (dnaE)
03440 Homologous recombination
IFJ75_07035 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgoe03032
]
IFJ75_07035 (dnaE)
03400 DNA repair and recombination proteins [BR:
bgoe03400
]
IFJ75_07035 (dnaE)
Enzymes [BR:
bgoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IFJ75_07035 (dnaE)
DNA replication proteins [BR:
bgoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IFJ75_07035 (dnaE)
DNA repair and recombination proteins [BR:
bgoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IFJ75_07035 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Endonuclease_NS
Motif
Other DBs
NCBI-ProteinID:
QTC92614
UniProt:
A0A975C526
LinkDB
All DBs
Position
complement(1422590..1426087)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSRFRPADEDQAITEAVSTTGFVHLRVRSAYSLLEGAIKAGKIPKLAADAGMPAVGVADR
ANLFGALEFSEAAKGAGVQPLIACALPVTGIGGRAGERWAKVPTVVLICQDTTGWGNLAA
LSSSAYLDAGDNEPGVPWEKIVAHSEGLILLSGGPDGPVDPLYVQNKTAEGDAALTEMAR
VFGDRFYVELQRHGLPHEGQGEQGLVQWAYANDVPLVATNDVYYAKQAQAKSHDALLCIA
DGAFTGQEDRRRITDQHWFKSAEAMRELFADLPEACDNTIDIARRCAFLVKTHAPILPRF
DTGAGRSEADELAHQAREGLKVRLTEVTAAVPEEEYWARLEWEVGIIQQMGFPGYFLIVS
DFIKWAKDHSIPVGPGRGSGAGSLVAWALTITDLDPLRFGLLFERFLNPERVSMPDFDID
FCQERREEVIDYVQAHYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLCKMVPN
NPANPVTLAQAIDLEPRLKEARDAEPAVKNLLETALELEGLYRNASTHAAGIVIGDRPLV
ELVPLYQDPRSTIPASQFNMKWVEPAGLVKFDFLGLKTLTTLDRAHGYLSRRGAAPIWNQ
LPLDDKTTYELMASGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMEMIDT
YIDRKFGRAEVDYLHPSLKEVLTETYGVIIYQEQVMKIAQILAGYSLGEADLLRRAMGKK
KKEEMDFQKARFIKGASEKSVPEQQSDSIFELVAKFAGYGFNKSHAAAYALISYQTGWLK
ANAPVEFFAASMSLDLSNTDKLAVFYQDARKFEVPVLAPDVNRSSADFDVAWEDGKGSVL
YALGAIRNVGLEAMKHLVEVRETGGRFTDIFDFLERVDPRAVNKRALEGLAKAGAFDSIH
PNRRQLLEQADVLMAYCQSVAADRTSSQVSLFGADQAAAARPRLKSVEPWIGPEQLDHEL
SAVGFYLSGHPLEDMIPALKRKRVTFVAEATALAESGHEAFMMAGVVRRRQERASARTGE
KFAFVNFSDPTGEFECLFPPEQLRKCREVLEVGASVLVRIRAKSSDGEVRFFGDDASRLD
TLIDESTAGMRVHVSARGTDAEAIRARLERSQQASKGAKGGEITLVASLDGRREVELRLP
GRYRMDAALRGALKSAPGVLMLEDA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcttccggcctgccgacgaggatcaggccatcaccgaagcagtctccaccacg
ggtttcgtccatctgagggtccgctcggcctattcgctgctggaaggcgcgatcaaggcg
ggcaagatccccaagttggcggcggatgcggggatgccggcggtgggggtggcggaccgc
gccaatctgttcggcgcgctggagttctcggaagcggccaagggcgccggggttcaaccc
ctgatcgcctgcgccctgccggtgaccggcatcggcggccgggcgggcgagcgctgggcc
aaggtcccgaccgtggtcctgatctgtcaggacaccacgggctggggcaatctagcggcc
ctgtcgtcctccgcctatctcgatgcgggcgacaacgagcccggcgtgccgtgggagaag
atcgtcgcccactccgaagggctgatcctgctgtcgggcggccccgacggcccggtcgat
cccctctacgtccagaacaagaccgccgagggcgatgcggctctgaccgagatggcccgg
gtcttcggcgaccgcttctatgtcgagctgcagcgccacggcctgccgcacgaggggcag
ggggaacaggggctggtccagtgggcctatgccaatgacgtgcccctcgtggccaccaat
gacgtctattacgccaaacaggcccaggcgaagtcgcacgacgccctgctgtgcatcgcc
gacggcgccttcaccggtcaggaagaccggcgccggatcaccgaccagcactggttcaag
tcggccgaagccatgcgcgagctgttcgccgacctgcccgaggcctgcgacaacaccatc
gacatcgcccgccgctgcgccttcctggtgaagacccatgcgccgatcctgccccgtttc
gacaccggggcgggccgctccgaggccgacgaactggctcaccaggcgcgcgaggggctg
aaggtccgcctgaccgaggtcacggccgcggtgccggaggaagagtactgggcccgtctc
gaatgggaggtcgggatcattcagcagatgggcttcccgggctacttcctgatcgtctcg
gacttcatcaaatgggccaaggaccactcgatccccgtcgggccggggcggggctccggg
gccgggtcgctggtcgcctgggccctgaccatcaccgatctcgatcccttgcggttcggc
ctgctgttcgagcgcttcctgaaccccgaacgggtctccatgcccgacttcgacatcgac
ttctgtcaggagcgtcgggaagaggtcatcgactacgtccaggcccattacggcaaggac
cgggtggcccagatcatcaccttcggcaccctgcaggcgcgggccgtgctgcgcgacgtc
ggccgggtgctgcagatgccgctgggccaggtcgaccgcctctgcaagatggtgcccaac
aacccggccaatccggtgaccctggcccaggccatcgatctggagccgcgccttaaggag
gcgcgcgacgccgaaccggcggtgaagaacctgctggagacggcgctggagctggaaggc
ctctaccgcaacgcctcgacccacgccgccggcatcgtcatcggcgaccggcccctggtc
gagctggtgcccctctatcaggacccgcgctccaccatcccggccagccagttcaacatg
aagtgggtcgagccggcgggtctggtcaagttcgacttcctcggcctgaagaccctgacc
acgctggaccgcgcccacggctatctgtcgcggcgcggcgcggcgccgatctggaaccag
ctgccgctcgacgacaagaccacctatgagttgatggcctcgggccagacggtcggggtg
ttccagctcgagtcccagggcatgcgcgacaccctgcgcaagatgcgctgcggctccatc
gaggagatcaccgccctgatctccctctatcggccggggccgatggagatgatcgacacc
tacatcgaccgcaagttcggccgggccgaggtcgactatctgcacccctccctcaaggag
gtcctgaccgagacctacggcgtcatcatctaccaggagcaggtgatgaagatcgcccag
atcctggcgggctactcgctcggcgaagccgaccttctgcgccgcgccatgggcaagaag
aagaaggaggagatggacttccagaaggcgcgcttcatcaagggtgcgtccgagaagtcc
gtgccggagcagcagtcggacagcatcttcgagctggtggccaagttcgcgggctacggc
ttcaacaagtcccacgccgccgcctacgccctgatcagctatcagacgggctggctgaag
gcgaacgccccggtcgagttcttcgccgcctccatgtcgctcgatctgtccaacaccgac
aagctggcggtcttctaccaggacgcccgcaagttcgaggtgccggtcctggcgcccgat
gtgaaccggtcctcggctgacttcgacgtggcctgggaagacggcaaggggtccgtgctt
tacgccctcggcgcgatccgcaacgtgggtctggaggcgatgaagcatctggtcgaggtg
cgcgagaccggcggccgcttcaccgacatcttcgacttcctcgagcgggtcgatccgcgc
gcggtcaacaagcgggcgctggaaggcctggccaaggccggcgccttcgacagcatccac
ccgaaccggcgtcagctgctggaacaggccgacgtcctgatggcctattgccagagcgtc
gccgccgaccggacctcgtcgcaggtgtcgctgttcggcgccgatcaggccgccgcggcc
cgcccgcgcctcaagagcgtcgagccgtggatcgggccggagcagctggatcacgagctg
tcggccgtcggcttctatctgtccggccacccgttggaagacatgatcccggcgctcaag
cgcaagcgcgtcaccttcgtcgccgaggccacggccctggccgagagcggccatgaggcc
ttcatgatggccggggtcgtgcgccgacggcaggagcgggccagcgcccgcacgggagag
aagttcgccttcgtcaacttctcggacccgacgggcgagttcgaatgcctgttcccgccc
gagcagctgcgcaagtgccgcgaggtgctggaggtcggggcctcggtgctggtgcggatc
cgggccaagtcctcggacggggaggtgcggttcttcggcgacgacgcctccaggcttgac
accctgatcgacgagtcgaccgcgggcatgcgggtccatgtctcggcgcgaggcacggac
gccgaggcgatccgagcgcggctggagcggtcgcagcaggcctcgaagggcgccaagggc
ggggagatcaccctggtcgcctcgctggacgggcggcgcgaggtcgagctgagactgccg
ggccgctaccgcatggacgccgccctgcgcggggcgctcaagtccgcgccgggcgtgctg
atgctggaggacgcgtga
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