Brevundimonas goettingensis: IFJ75_10015
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Entry
IFJ75_10015 CDS
T07668
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bgoe
Brevundimonas goettingensis
Pathway
bgoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IFJ75_10015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgoe03019
]
IFJ75_10015
03009 Ribosome biogenesis [BR:
bgoe03009
]
IFJ75_10015
Enzymes [BR:
bgoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IFJ75_10015
Messenger RNA biogenesis [BR:
bgoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IFJ75_10015
Ribosome biogenesis [BR:
bgoe03009
]
Prokaryotic type
rRNA helicases
IFJ75_10015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QTC89656
UniProt:
A0A975BY83
LinkDB
All DBs
Position
2005798..2007888
Genome browser
AA seq
696 aa
AA seq
DB search
MPFPASHPALDLALSERGYAEPTPVQAAVLESEVGRDLLVSAQTGSGKTVAFGLALASTL
IGDADRIEDNGAPAALIIAPTRELALQVSKELEWLYSKAGARIATCVGGMDPRAERRTLE
RGAAIVVGTPGRLKDHLERGALDLSGLKAVVLDEADEMLDMGFAEDLTFILDSAPAERRT
LLFSATLARDIVQLARTYQRDAIRIDTVAGAGSHADIEYKAIRIAPNEVELGVVNVLRYF
EAPGALVFANTRERVKHLTASLRERGFAVVGLSGELTQAARSEALQALRDGHARVCVATD
VAARGLDLPDLGLVIHAEIPVNKATLLHRSGRTGRAGKKGVSVMMVSYTRRRKVELMLQS
AGITAEWAGPPSAEMILEKDRERLLADPALTAPVDDAEALELGKLLLERTSAEQIAASLI
RLYRQKLPSPEDVYDDDRMKRAQATGVNDRGQRDGPLTDFARGGDMAWFRINIGRDKNAD
PKWLLPTLCRLGHVTKGDIGSIKIFDRETKFEITKSAEAKFRAAIASGLEDGVTVNDAVA
PGPKEKPASRWDKKPSGDGDRPERKPWAKKSEGGAPRGDKPAWKDREGGFEKKPWAKDAP
AGEKKPWVKREDAAPAGEKKPWVKRDAPAHATDGDAKPKWVKRTKDAPTPEGKTAWVEKP
KGPKKAWAPRSDAAPAPAGDKPWTGKPFKGKKKSNG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccccgccagccaccccgcgctcgacctcgcgctttccgaacgcggctatgcc
gagcccacccccgtccaagccgccgtgctggaaagcgaagtcggacgtgacctgctggtc
tcggcccagaccggctccggcaagaccgtcgccttcggcctggccctcgcctcgaccctg
attggcgacgccgaccgtatcgaggacaacggcgcccccgccgccctgatcatcgccccg
acccgcgaactggccctgcaggtctcgaaagagctggagtggctctattccaaggccggc
gcccgcatcgccacctgcgtcggcggcatggacccccgcgccgagcgccgcaccctggaa
cgcggcgccgccatcgtcgtcggcacccccggccgtctgaaggaccatctggagcgcggc
gcgctggacctctccggcctcaaggccgtcgtcctcgacgaggccgacgagatgctggac
atgggcttcgccgaagacctgaccttcatcctcgacagcgccccggccgagcgtcgcacc
ctgctgttctcggcgaccctggcccgcgacatcgtccagctggcccgcacctatcagcgc
gacgccatccgcatcgacaccgtcgccggcgccggctcgcacgccgacatcgaatacaag
gctatccgcatcgccccgaacgaggtcgagctcggcgtcgtcaacgtcctgcgctatttc
gaggcccccggcgccttggtcttcgccaacacccgtgagcgggtgaagcacctgaccgcc
tccctgcgcgagcgcggcttcgccgtcgtcggcctgtcgggcgaactgacccaagcggcc
cgctccgaggcgcttcaggccctgcgcgacggccacgcccgcgtctgcgtcgccaccgac
gtcgccgcccgcggcctcgacctgcccgacctgggcctggtcatccacgccgaaatcccg
gtcaacaaggccaccctgcttcaccgttcgggccgcaccggccgtgcgggcaagaagggc
gtctcggtgatgatggtctcctacacccgtcgccgtaaggtcgagctgatgctccagtcg
gccgggatcaccgccgaatgggccggcccgccctcggccgagatgatcctcgagaaggac
cgcgagcgcctgctggccgatcccgccctgaccgcccccgtcgatgacgccgaggctctg
gaactcggcaagctgctgctggaacgcacctccgccgaacagatcgccgcctccctgatc
cgcctctaccgccagaagctgccctcgccggaagacgtctatgacgacgaccgcatgaag
cgcgcccaggcgaccggcgtgaacgaccgcggccagcgcgacggcccgcttaccgacttc
gcccgcggcggcgatatggcctggttccgcatcaacatcggccgcgacaagaacgccgac
ccgaaatggctgctgccgacgctctgccgtctgggccacgtcaccaagggcgacatcggc
tcgatcaagatcttcgaccgcgagaccaagttcgagatcaccaaatcggctgaagccaag
ttccgcgccgccatcgcctcgggtctggaagacggcgtgaccgtcaacgacgccgtcgcc
ccgggcccgaaggaaaagcccgccagccgctgggacaagaagccctcgggcgacggcgat
cgtcccgagcggaagccctgggcgaagaagtccgagggcggcgctccgcgtggagacaag
cctgcgtggaaggaccgtgaaggcggtttcgagaagaagccctgggccaaggacgcgcct
gccggtgagaagaaaccttgggtcaagcgcgaggacgccgcgcccgccggtgagaagaag
ccctgggtcaagcgcgacgctccggctcatgccaccgacggcgacgccaagcccaaatgg
gtcaagcgcaccaaggacgccccgacgcccgagggcaaaacggcctgggtcgaaaagccc
aagggcccgaagaaggcctgggccccgcgcagcgacgccgcccccgctcccgccggcgac
aagccctggaccggcaagcccttcaagggcaagaagaagtcgaacggctag
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