Brevundimonas goettingensis: IFJ75_19160
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Entry
IFJ75_19160 CDS
T07668
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bgoe
Brevundimonas goettingensis
Brite
KEGG Orthology (KO) [BR:
bgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgoe03400
]
IFJ75_19160 (addB)
Enzymes [BR:
bgoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IFJ75_19160 (addB)
DNA repair and recombination proteins [BR:
bgoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IFJ75_19160 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QTC91286
UniProt:
A0A975GVD3
LinkDB
All DBs
Position
3899164..3902259
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AA seq
1031 aa
AA seq
DB search
MTGPFDPFAGAGPRWLTIPAHRPFLEDLAAGVLDWLGDAPPETLSDAVILLPNRRAARAF
GAALSRLSGDKPILLPQVRPLGDLEEDEPPFAPGEIGLDLPPAIAPLTRRFEMARMIAED
LKDEFEDALTPLRALELADAFAGFLESCQIEEIHDLSKVGSLVQVDLAEHWQVSAKFLGL
AVQAWPDRLAGLGMMDPAERRAKLLRLLAQRWDEAPPTGPVIAAGSTGSAPAAAAVLKAV
AKAPQGCVVIPGLDMNLDPAVWATLGEEEQHPQNALWRLLDFAKVERESVRPWFQPATSP
VVQARGLARARLINEALRPARATSDWRDEIRRIREAAAPVQGADPIALGLENLGVMTLRA
EEDAAATLALMMRETLETPGKTCALVTPDLDLGRRVAARLERWGIVPDSSSGAPLSRMNA
GVLIDLTARWIADPLKPQTILALLKHPLVRIEMEEAGAAVRAFEKYALRGPRGRRWTDLH
RNLKRAAEPREGQSPPSEHRLKRLGQARELSDRLEALSAEAVAVFTPAASLEAAAVALTR
LVEALAGQNAWAGPDGESAASVLSGLIEGGAALGAVKPAELAELIQSLLADATVRTGGAT
HPSLRILGAIEARLVRADRMILAGLEEGVWPGPAPTDPFLSRPMRKALGLPPPERRLGQT
AQDFVQAACADEAILVHVDRRGGQPAVKSRWLWRLEMLTRGANSEATPVVLERPVAAAGI
ARALDAPPPGPARYARRPTPTPPVDRRPREMPVTGVERWVRDPYAVYAQRILGLKKLDRP
GADAEAMARGNAIHAAIERIVVTWPEALPSECAVQIEGFIRDAMTEAGFEDHAMAREAPL
ARNCALWLANWERERRARGATLLIEQSGRVSFPAPGGDFVLTARADRIELDAAGAAVIDF
KTGGTPSVKQVAQGYSPQLTLTAAILAGGGFAEAPPTEATELLYVRVTGRKVPGVVVEAS
KTSKNQPLEAAALAEEAFEKLKEWVAHFDDETTPYASWLAPQFMGTFGGNYDHLARVWEW
HVVGGEEEAPE
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcccgttcgatccgttcgcgggcgcgggtccgcgctggctgaccattccggcc
caccggcctttccttgaggatctggcggcgggggtgctggactggctgggcgacgccccg
cccgagactctgagcgacgccgtcatcctcctgcccaaccggcgcgcggcccgggccttc
ggcgcggccctgtcgcggctgagcggggacaaacccattctgctgccgcaggtgcggccg
ctcggcgatctggaggaggacgaaccgcccttcgcgcccggcgagatcggtctcgacctg
ccgcccgccatcgcccccctgacgcgccggttcgagatggcgcggatgatcgccgaggac
ctcaaggacgagttcgaggacgccctgacgccgctgcgcgcgctggaactggccgacgcc
ttcgccggcttcctcgagtcctgccagatcgaggaaatccacgacctgtcgaaggtcgga
tctctggttcaggtcgatctggccgagcactggcaggtgtcggcgaaattcctggggctg
gcggttcaggcctggcccgaccggctggcgggtctcggcatgatggacccggccgagcgg
cgggcgaagctgctgcgcctcctggcacagcgctgggatgaagccccgccgaccggtcct
gtcatcgccgccggttcgaccggctcggccccggccgccgccgcagtgctgaaggccgtc
gccaaggcgccgcagggctgtgtggtcatcccgggcctcgacatgaatctcgaccccgcc
gtctgggcgacgctgggcgaggaggaacagcatccgcagaacgccctgtggcggctgctc
gatttcgcgaaggtcgagcgcgagtcggtgcggccctggttccagccggcgacgtccccc
gtcgttcaggcgcgaggtctggcccgggcgcgactgatcaacgaggccctgcgtcccgcc
cgcgcgaccagcgactggcgcgacgagatccgtcgcatccgcgaggcggcggcgccggtg
cagggcgccgatccgatcgccctcggacttgaaaacctcggcgtcatgaccctgcgcgcc
gaggaggacgcggccgcgaccctcgctctgatgatgcgcgagacgctggaaacgcccggc
aagacctgcgccctcgtcacccccgacctcgacctcggacgccgtgtcgctgcgcgcctg
gagcggtgggggatcgtgcccgactcctcgtccggcgcgcccctttcgcgcatgaacgcc
ggcgtgctgatcgacctcaccgcgcgctggatcgccgatccgctcaagccccagacgatc
ctcgccctgctcaaacatccgctggtgcggatcgagatggaggaggcgggggccgccgtc
cgcgccttcgagaaatacgccctgcgcggcccgcgcggccgccgctggacggacctccac
cgcaacctgaaacgggcggccgaaccgcgcgagggccagagcccgccgtcggagcaccgg
ctgaaacggctgggtcaggcccgcgaactcagtgaccggctggaagccctgtcggcggag
gccgtcgccgtctttacccccgccgcctcgctggaggccgccgccgtggccctgacgcgg
ctggttgaggccctggccggccagaacgcctgggccggcccggacggggagagcgcggcc
agcgtcctgtcgggtctgatcgagggcggtgcggccctgggcgcggtcaagcctgccgaa
ctggccgaactgatccagtcgctgctggctgacgccacggtgcggaccggcggggcgacc
catccttccttacgcattctcggggccatcgaggcgcgtctggtccgggccgaccggatg
atcctcgcgggtctggaggagggcgtctggccgggcccggcgccgaccgatcccttcctg
tcgcgcccgatgaggaaggcgctgggcctgccgccgcccgaacggcgtctgggccagacg
gcgcaggacttcgtccaggccgcctgcgccgacgaggccatcctcgtccatgtcgaccgg
cgcggcggccagccggcggtcaagtcgcgctggctgtggcggctggagatgctgacgcgc
ggggcgaacagcgaggcgacgcccgtggtgctggaacggcctgtcgccgccgccggcatc
gcccgggcgctggacgccccgccgccggggcccgcccgctacgcccgccgcccgacgccg
accccgcccgtcgaccggcgtccgcgcgagatgccggtgaccggggttgagcgctgggtc
cgcgacccctacgccgtctatgcccagcgtattctgggcctgaagaagctcgaccgcccc
ggcgctgacgccgaggccatggcgcgcggcaatgccatccatgccgccattgagcgcatc
gtcgtgacctggcccgaggccctgccgtccgaatgcgccgtccagatcgagggcttcatc
cgcgacgccatgaccgaggccgggttcgaggaccacgccatggcccgcgaggcgccgctg
gcccgcaactgcgccctgtggctggcgaactgggagcgcgagcgtcgggcgcgcggcgcg
accctgctgatcgaacagtcgggacgggtgagtttcccggcccccggcggcgacttcgtc
ctgaccgcccgcgctgaccggatcgagctggatgccgccggcgccgccgtcatcgacttc
aagaccggcggcacgcccagcgtgaaacaggtggcgcaagggtactctccccaactgacc
ctgaccgccgccatccttgcgggcgggggttttgccgaggccccgcccacggaggcgacc
gagctgctctatgtccgggtcaccggccgcaaggtcccgggcgtggtggtcgaggcgtcc
aagacctcgaagaaccagccgctcgaggccgccgccctggccgaagaagcgttcgagaag
ctcaaggaatgggtcgcccatttcgatgatgagacgacgccctacgcctcctggctggcg
ccccagttcatgggaaccttcggcggcaactacgaccatctggcccgggtctgggaatgg
catgtggtcggcggcgaggaagaggcgcccgaatga
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