Bythopirellula goksoeyrii: Pr1d_02100
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Entry
Pr1d_02100 CDS
T09914
Symbol
lgrD_1
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
bgok
Bythopirellula goksoeyrii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
PP-binding
Hexapep
AMP-binding_C
Hexapep_2
Motif
Other DBs
NCBI-ProteinID:
QEG32949
UniProt:
A0A5B9Q5K4
LinkDB
All DBs
Position
complement(251768..255763)
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AA seq
1331 aa
AA seq
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MANLTISDTLCVHELFESHVEQNPCQTALVCGEVEWSYEELDRRANQLARHLKSCGIGPG
NFVGLFMRRSENSILAILAVLKAGAAYVPIDPAFPDMRIGHILEEAEVTALLTEQAHASR
AKTYFGGLCIICDDSSPDISAQSTDRLSIDETGVTAEDLCYVLYTSGSTGRPKGVMTEHR
NVVRFVQAFNEELRLTSEDRVYHGFALGFDGSVEEMWMAFSNGACLVVGTTEIAHVGNEA
AKLLCDLGISVLSTVPTCLGMIHDDIPSLRLIIVSGEPCPAALVNKWATNNRRMLNVYGP
TETTVNATVAECVPNEQVTIGRPLNGYEALILDRNMQPVPPGNRGELYIGGVGLARGYLG
QPDQTIRQFVDNPLRSNGHSSKLYRTGDLVERTATGDLVFHGRIDRQVKVRGYRIELAEI
ESVLRGHSAIDQAVVNIVDKGGQKELAAYVVPANSVESIDRDEILNWLKDHVPHYMIPSF
LDNLDVLPTLDSGKVDRNRLPAPKLPLVPVKRSVVEPRNELESRIVSVWEKLFSVSSISI
EDDFFLDLGGYSLLAVEMALLLRKEYGYDVAIRDVYMNPTVVQLAEHVSSSVVNESEASL
ESSVASPAPVTSREVFQSVPRLTRYICYCLQAVSVAVIYSLAATPLLIGILLTFALLTAK
VSLNAYIWSMSAAVFFAPLVGILLSIAVKWVVIGRYKPGEYPVWGFYYFRWWLVTRTQFL
AWTDIYIGSPLMSFYYRLMGAQVGKNSLFDSNNCVIFDLLSVGDDTCIGSETHFLGYRVE
DGLLKIGSIEIGSRCFVGTQCALGINTRMEDDALLDDMSLLPDNSTIGSGEAFAGSPAQP
ATVKVPDIDIGKQVSSRRTGLYCMLHFISSEIFGEILLLGIIMPIALLLIAGFRYGGAAG
SITSLFMGLPLCLVWFCLFVAAVKRTLLPKSDTGVHSLESWVYLKRWSADLFLRYASSIV
YPVYSTIFLPSWLRMLGANIGSRAEISTVTHVTPDLVTIGQESFLADGSMIGGRRLYRGH
FQVSFNRIGSRTFLGNGALLPDGIELGSNCLVGVLSVPPTSNASEFTDNTEWLGSPPFRL
PHREKVQGFDDATIFRPTLRLYVTRIFIDGLRVLLPYYIGMLALALFSVCVVAGVSRFSP
GAILALVPVLVSFLVVFSLLLVVAIKQICMGTIKPVIKPLWCVYIWLNELTNAVFEMITM
SLAWPLFGTPFFSSYLRLLGCKIGKGAFIETELFSEFDLVSIGNYAALNSGAVIQNHLFE
DRIMKSSSLVVGDECSVGNMSIVLYDSEMQQGSSIGPLSLLMKGDSLPEKTRWIGIPINQ
LRDPGNSSHDS
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgacgatatcggacacactgtgtgttcatgagctgtttgaatctcacgta
gagcagaacccctgtcaaacggcgttggtttgcggtgaagttgagtggtcgtacgaagaa
cttgaccgacgcgcgaatcagcttgcccggcatctcaagtcttgcggtatcggacctggg
aatttcgttggtctcttcatgcgccgttctgagaactcgattcttgccattctggcggtg
ctcaaggcaggtgccgcttatgttccaattgacccggccttccccgacatgcgcattggg
cacattctcgaagaagccgaagtgacagcacttctgaccgaacaagcccacgcatccaga
gcaaaaacctatttcggtggactatgcatcatttgtgacgatagcagtcctgacatttca
gctcaatccactgatcgattgtcaattgatgagacgggcgtgacagcagaagacctctgc
tacgttctttacacttctggcagtacagggcgccccaagggcgtgatgaccgagcatcgg
aatgttgtccgctttgtgcaggctttcaacgaggaattgcgactcacttctgaggaccgc
gtctaccatggcttcgcgcttggatttgacggttccgtcgaagaaatgtggatggccttt
tccaatggcgcgtgtttggtggtaggaaccacagagatcgcacatgttggcaacgaagca
gccaagttgctctgcgatttgggtatcagcgtcctctcgacggtcccgacctgtttggga
atgattcatgacgacattccgagtctgcgcctgattatcgtaagtggcgagccgtgcccg
gctgcgttggtgaacaaatgggccacaaacaaccgtcgaatgctcaatgtctacggaccg
actgaaacaacagtcaatgcgacagtggccgaatgtgtgcctaatgaacaggtgactatt
gggcgtccgttgaacgggtatgaagccttgattctagaccgcaatatgcaaccagtgcct
ccaggaaacagaggcgaactctacatcggcggtgttggccttgcacggggatacctagga
caaccagaccaaaccataaggcagtttgtcgacaatcccctgcgtagcaacggccatagc
tcgaaactctaccgtacgggagatctggtcgaaagaactgctaccggtgatttagtgttt
cacggtcggatcgaccgacaagtgaaagtgcgtggataccgtatcgagcttgctgagata
gagtcggtactacgtggacactcagccatcgatcaggcggtagtaaatatcgttgataaa
ggtggtcaaaaggaactcgctgcttacgttgttccagccaactcggtggaatctatcgat
cgagacgagattttgaattggctcaaagaccacgtgcctcattacatgattccaagtttt
ctcgacaatttggatgtcctgcccacgttggatagtggcaaagttgaccgtaatcgtctc
ccggccccgaagcttccgctggtgccggtcaaacgatctgttgtagaacctcgaaatgag
ttggaatctaggatcgtaagcgtatgggagaagttgtttagcgtgtcctctatctcaatc
gaggacgatttctttctagaccttggtggctactccttactagcagtggagatggcattg
ctgctgcggaaagagtacggttatgacgttgcgattcgcgatgtctacatgaatccaacg
gtagttcagcttgctgagcatgtatccagttcggtggtcaatgaatcggaagcatcgctt
gagagttcggtagcctcacctgcgcccgtgacaagtcgagaagtcttccagagtgtaccc
cgcttaactcgatacatttgctactgtcttcaagcggtttcagtggctgtgatctacagt
ttagccgcgactcccctgttgataggcattcttcttacatttgcgctgctcacagcgaag
gtatcgctgaatgcctacatttggtccatgtcagcagccgtcttctttgcccctctagtt
gggattctactctcgattgctgtgaaatgggtggtcattgggagatataagcctggcgaa
taccctgtctggggtttctattacttccgctggtggttggttactcgaactcagtttttg
gcgtggacagatatttacattggctcccccctcatgagtttctactaccgattgatgggt
gcacaggtcgggaagaatagcctttttgattcgaacaattgtgtgatatttgatctgctt
tccgttggagacgacacgtgtattggatcggaaactcattttttgggttatcgagtcgaa
gatggcttattgaaaattggttctattgagattggaagcagatgttttgtaggcacccaa
tgtgctttgggtattaatacacggatggaagacgacgccctactcgatgacatgtcgttg
ttgccagacaactcgaccattggcagtggtgaagcatttgctggatctccggcacagccc
gctacggtcaaggttcctgacattgacattgggaagcaagttagttctaggcgaacaggg
ttgtattgcatgttgcacttcatcagcagcgagatcttcggtgaaattctgctgttgggt
attatcatgccgatcgctttgttgctgattgctggctttcggtatggaggtgctgcaggg
agcatcacttcgttattcatgggtcttccactttgcctggtctggttctgtctttttgta
gcggctgttaagcgtacactgctgccaaaatcggataccggcgtccattccctcgagagt
tgggtttatctgaagagatggtcagctgatctatttctgaggtacgcctcatcaatcgtc
taccctgtttactcgacaatttttctccccagttggctccgtatgcttggtgccaatatc
ggctctcgagcagagatatctacagtcactcatgttactcctgacttagtaacaatcggg
caagagagttttctggctgacggctcgatgatcggtggcaggcgtctctatcgagggcat
tttcaggtcagtttcaatcgcattggctctcggacttttctaggcaacggggctctgctt
cctgatgggattgaacttggtagcaattgtcttgtgggtgtcctttcggttccccccact
tcgaacgcttccgagtttacggacaacacggagtggcttggctctccaccattcagactg
ccgcatcgggagaaggtgcaaggatttgacgatgcgacaatatttcggcctaccttgagg
ctctacgtaacgcggattttcatcgacgggctgagagtgttgctcccttattacatcggt
atgctcgcattggcattgtttagtgtctgcgttgtcgccggcgtgtctaggttctcacct
ggggcaattcttgcgcttgtccccgtactcgtttcctttctcgtagtcttttccttgctc
ctagtagtggccattaagcaaatctgcatgggaacaattaagcccgtcatcaagccacta
tggtgcgtctatatctggctgaacgagttgacgaatgccgttttcgagatgatcactatg
tcgctcgcgtggccactgttcggcactccattttttagctcgtatttgcgattactggga
tgtaaaataggaaaaggggccttcatcgaaacggagctcttttcggaatttgatttggtc
agtattggcaactacgctgcgctgaattccggggcagtaatccagaatcacctcttcgaa
gaccgcattatgaaatcctcgtcgttggtggtaggtgatgaatgttccgtaggaaatatg
tcaatagtattgtacgactcagaaatgcaacaaggctcctcaattggcccgctgtcattg
ttgatgaagggcgactcattgcctgaaaagacacgatggattggtattcccatcaatcaa
ttgcgtgatccaggaaactcctcgcatgactcataa
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