Bythopirellula goksoeyrii: Pr1d_02810
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Entry
Pr1d_02810 CDS
T09914
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
bgok
Bythopirellula goksoeyrii
Pathway
bgok00541
Biosynthesis of various nucleotide sugars
bgok01100
Metabolic pathways
bgok01250
Biosynthesis of nucleotide sugars
Module
bgok_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Pr1d_02810 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bgok01005
]
Pr1d_02810 (kdsA)
Enzymes [BR:
bgok01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Pr1d_02810 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
bgok01005
]
Lipid A
Pr1d_02810 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QEG33020
UniProt:
A0A5B9Q5K8
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All DBs
Position
335908..336750
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AA seq
280 aa
AA seq
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MESTVPNYPSQIGPLLCGRDQPLLWIAGPCVLESRDSALEIAEELQRVARLLSVQLIFKA
SFDKANRTSSSSYRGPGLDDGLKILHDIGQTTGLAITTDVHESQQASAAGEVCDLLQIPA
FLARQTDLLVAAAHTGKAVNVKKGQFMSPGDMQFVIAKLADAGCENILLCERGTFFGYGR
LVNDMRAIPQMQSFGVPVVFDATHSVQEPGGLGGATGGNRAMVEPLARAAMAVGAEGLFT
ETHPDPDKSPSDGANMIPLCQIESVMRRLVAIRQATAQIE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggaatctacagtgcccaattacccctcccaaataggtcctcttctgtgcggaagagat
caaccgctactgtggattgcagggccgtgcgtgctggagagtagagattcggcactagag
attgccgaggagttgcagcgtgtggctcgcctgttgtcggttcagttgatatttaaggcc
tctttcgacaaggccaaccgtaccagcagcagttcctatcgtggcccaggactcgatgac
gggctaaagattctccatgatatcggccagactaccgggttggctattacgaccgacgtc
catgaatcgcagcaagcctccgctgcgggggaagtatgcgacctattgcaaatccctgcc
ttcctcgcgcgccagacagatctcctggttgctgctgctcatactggtaaggcggttaac
gtgaagaagggccagttcatgtcccctggcgatatgcaatttgtcattgccaaacttgca
gatgccggttgtgaaaacatcttgctctgcgaacgaggaacttttttcgggtatggtaga
ttggtgaacgacatgcgagccattccccagatgcagtccttcggagtgcccgtcgtattt
gacgcgacccacagcgtccaagagcctggcgggcttggcggagcaacgggtggcaatcgc
gcgatggtagaacctttagcccgcgcagcaatggcagtcggtgcggaaggattatttaca
gagacccatcctgaccccgacaaatcaccaagcgacggtgcaaacatgattcctctgtgc
cagattgagtcggttatgcgacgtctcgtggccattaggcaagcgaccgcccaaattgag
tga
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