Bythopirellula goksoeyrii: Pr1d_02900
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Entry
Pr1d_02900 CDS
T09914
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bgok
Bythopirellula goksoeyrii
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgok03019
]
Pr1d_02900 (yhaM_1)
Messenger RNA biogenesis [BR:
bgok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pr1d_02900 (yhaM_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
HDOD
MATCAP
Motif
Other DBs
NCBI-ProteinID:
QEG33029
UniProt:
A0A5B9Q5S3
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All DBs
Position
complement(344500..345540)
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AA seq
346 aa
AA seq
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MSNAQTSLFDGGDVSSSLTPLSELTNGQEADFFALLSAKEELTTKNGKPYYKVAFRDAHR
EVSFPIWNDTSWATVCRDQWTVGEFYKLRALYRETDYGPQLEIRKIRVVVEADAAEGFRP
EMCLPSSRFDPHEMYEELIALTKDLIEDTEVSTFVQAILEEYQVTLLTLPAAKFNHHAHV
GGFLEHVLSVAKTCVYFADKYAELYPEMELDKDLVIAGGILHDIGKVRELSTTPAGAEYT
PAGTLIGHILQGRDIIRETAEENTISDEKLLRLEHIIVAHQRLPEWGSPKPPMTPEALIV
HHADDLDAKLQMMAMALEDDTTEGPFTSSRNPLRQKIYRGGEAEEA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgcccaaacttctctctttgatggcggggacgtatcctcgtcgctcacgcca
ctttctgaattgaccaacgggcaggaggccgattttttcgccctgctctcggcgaaagaa
gaactgaccaccaagaacggcaagccctactacaaggtggcttttcgtgatgcccatcgc
gaggtgagttttccgatttggaatgacacaagctgggcgaccgtctgtcgcgaccaatgg
acggtcggcgaattctacaaattacgggcactctatcgggaaaccgattatggcccgcag
ttggagatccgcaagattcgtgtcgtcgtcgaggcggatgcggcagagggtttccgcccg
gagatgtgcttgccgagttcgaggttcgatccacacgagatgtacgaggagctaatcgcg
cttaccaaagacctgatcgaagacacagaggtctcgacctttgtgcaggcgatactcgaa
gagtatcaggtgacgttgctcactctcccagcggccaaattcaatcaccatgcccatgtc
ggcgggtttctggagcatgtgttaagtgtggctaagacgtgcgtgtactttgcagataag
tatgccgagctgtatcccgaaatggaattagacaaggatctggtgattgcgggcggaata
ttacatgatattggcaaagttcgcgaactcagcacgacccccgccggtgccgagtacacc
cccgccggcaccctcatcggccacatcctgcaaggccgcgacatcatccgcgagacggcc
gaggagaacacgatctcggatgagaaattgttgcggcttgagcacatcatcgtcgcccac
caacggctccctgaatggggctctccgaaaccccccatgacccccgaagccttgatcgtc
caccacgccgatgaccttgacgccaagctacaaatgatggcgatggccctcgaagacgac
accaccgagggaccgtttacgagtagtcgtaatcctcttcggcagaagatatatcgtggg
ggtgaggccgaagaagcgtaa
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