Bythopirellula goksoeyrii: Pr1d_08770
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Entry
Pr1d_08770 CDS
T09914
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bgok
Bythopirellula goksoeyrii
Pathway
bgok00521
Streptomycin biosynthesis
bgok00523
Polyketide sugar unit biosynthesis
bgok00541
Biosynthesis of various nucleotide sugars
bgok01100
Metabolic pathways
bgok01110
Biosynthesis of secondary metabolites
bgok01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Pr1d_08770 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Pr1d_08770 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Pr1d_08770 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Pr1d_08770 (rfbB)
00525 Acarbose and validamycin biosynthesis
Pr1d_08770 (rfbB)
Enzymes [BR:
bgok01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Pr1d_08770 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
NmrA
NAD_binding_10
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QEG33613
UniProt:
A0A5B9QHL5
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Position
complement(1055114..1056157)
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AA seq
347 aa
AA seq
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MSRSDHTILITGGAGFIGSSLVRSCLRDTTLTVINLDKLTYAGHRESLSEVLEDPRHTLI
VGDISDRELVAQTLRDHRPQAIIHLAAESHVDRSIADPPSFATTNVLGTCVLLEAVTDYW
QKLPTDDRAAFRFLNVSTDEVFGTAQPGEQFTEMSLLAPNSPYAASKAAGELLARSFGKT
YGLPVVTANPSNNYGPRQHPEKLIPRMILAAARGEPLPVFGDGLYERDWLHVEDCCRALL
AILDQAQPEERYLVGANQCLQNLEVVATICDLVDEFLDDRSSRRELIAHVIDRPGHDRRY
AVDASVLRSKTSWQPQIKFDLGLRETVGWYLNHSDWVSAVLSKEISR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctcagatcatactattttgataaccggaggtgccggcttcatcggcagttcc
ctggtacgctcttgccttcgtgataccactcttactgtcatcaatcttgataaactcacc
tatgcgggtcatcgtgaatcgctctccgaagtcctggaagatcctcgccatacgctcatt
gtgggggacatctctgaccgggaattagtggcgcaaactttaagagatcatcgcccccaa
gcgattatccatcttgctgcagaatcgcatgttgatcgatcgattgcagaccctccgagt
ttcgctacgaccaacgttctcggaacttgtgtgctattggaagcagtgaccgattattgg
caaaaacttcccactgatgaccgcgcggcttttcgttttctcaacgtctcgaccgatgaa
gtctttggcaccgctcagccgggagagcagttcacagaaatgagcctgctcgctcccaat
tctccttatgctgcttcgaaagccgccggggaattactggcacgctcctttggcaagaca
tacggattaccagtcgtaaccgcaaatcccagcaataactatggccctcgacaacaccct
gagaaacttattccccgtatgattctcgcggcagcgcgcggggagcctttacccgttttc
ggcgacgggctttacgagcgagattggctgcatgtcgaagattgctgtcgagcactgctg
gcgattctcgatcaggctcagcctgaggagcgttatcttgtgggtgcaaaccagtgcctg
cagaatctagaagttgtggccacgatttgcgatttggtcgacgaattcttagacgataga
tcgtctcgcagggagttgattgcccacgtcatcgatcgccccggacacgaccgacggtat
gccgtcgatgcaagtgtgttacgttctaagacgtcttggcagccccaaatcaaatttgat
ttgggactgcgagaaacggtcggctggtatctgaatcactccgattgggtgtcggcagtc
ttgagcaaggaaatctcgcgatag
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