Bythopirellula goksoeyrii: Pr1d_10570
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Entry
Pr1d_10570 CDS
T09914
Symbol
gcdB
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
bgok
Bythopirellula goksoeyrii
Pathway
bgok00362
Benzoate degradation
bgok00620
Pyruvate metabolism
bgok00650
Butanoate metabolism
bgok01100
Metabolic pathways
bgok01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Pr1d_10570 (gcdB)
00650 Butanoate metabolism
Pr1d_10570 (gcdB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Pr1d_10570 (gcdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bgok02000
]
Pr1d_10570 (gcdB)
Enzymes [BR:
bgok01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Pr1d_10570 (gcdB)
Transporters [BR:
bgok02000
]
Other transporters
Primary active transporters [TC:
3
]
Pr1d_10570 (gcdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
QEG33787
UniProt:
A0A5B9Q480
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All DBs
Position
complement(1273993..1275141)
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AA seq
382 aa
AA seq
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MEFVDYLSSKAIQLYQTTAFPNMQLGNLAMIAIGLAFVYLAIAKHYEPLLLIPIGFGIVV
GNIPAVQGMSLGVYDEGSVLRYLYFGVEKGVYPPLIFLGIGAMTDFSTMLSNPKLVLLGA
AAQIGVFLTFLGALCLGFTPQESGAVGIIGGADGPTAIFLSSKLAPSLLGAIAIAAYSYM
ALVPVIQPPIMYLLTSHEERLIRMKRPRHVSRRERIIFPIAAFLICTLLAPGALVLIGML
FFGNLLKECTVTERLANTARTVFIDIVTILLGFCVGASTSASYFLQPTSILIFVLGALSF
AVATGGGILFAKLMNLFLHEPINPLLGAAGVSAVPDSARVVHMVGLNEDPQNHLLMHAMA
PNVAGVIGSAIAAGVLWSQLAM
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgttgactacctaagctccaaagccattcaactctaccaaacgactgccttt
ccgaatatgcagttgggcaatctcgcgatgatcgcgattggtcttgcgtttgtttatcta
gccattgccaaacactacgaaccactactgcttattccgattggttttggaatagtcgtg
ggaaatatccctgcagtccagggcatgagcctcggagtttatgatgaaggaagtgtcttg
cggtatctctacttcggagtagagaaaggtgtctatccaccactgatctttttggggatc
ggcgccatgacggacttctcgacgatgctctcaaaccccaaactcgtattgctgggagcc
gcagctcagatcggtgtgtttcttacttttctgggagccctttgccttggattcacccct
caggaatcgggtgctgtcggcatcattggcggtgccgatggaccaactgcaattttcttg
tcttcaaaactggccccttcgcttttgggtgcaatcgcaatcgcggcctattcctacatg
gcccttgttccggtgatccaacctccgatcatgtacttgttgacctctcacgaagaacgc
cttattaggatgaaacgtcctcggcacgtctctcggcgcgagcggattatattcccaatc
gctgcattcttgatatgcacactcctggcaccaggcgcattggtgctaatcggaatgctc
ttctttggtaatctgctcaaggaatgtacggttactgaacgactagcaaatacggcacgc
accgtgtttatcgacattgtgacaatcttgttgggcttttgcgtcggtgccagcaccagt
gcaagttatttcctgcagcccacgtccattctgatttttgtgctgggggccctatctttc
gccgtggcaacggggggcggcattctattcgcaaaactaatgaatctgtttctacatgaa
cctatcaatcccctgcttggcgcagcaggagtatcagcggttcccgattcagcgagggtc
gtgcatatggtaggattgaacgaggatccccaaaatcacctgctcatgcatgccatggca
ccaaacgtcgccggtgtaatcggctcggccatcgcggctggggtgctgtggtcgcaattg
gcgatgtag
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