Bythopirellula goksoeyrii: Pr1d_14980
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Entry
Pr1d_14980 CDS
T09914
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bgok
Bythopirellula goksoeyrii
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgok03016
]
Pr1d_14980 (truB)
Enzymes [BR:
bgok01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pr1d_14980 (truB)
Transfer RNA biogenesis [BR:
bgok03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pr1d_14980 (truB)
Prokaryotic type
Pr1d_14980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QEG34225
UniProt:
A0A5B9Q9H0
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All DBs
Position
1794120..1794992
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AA seq
290 aa
AA seq
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MLGFLNINKPAGWTSRDVVNRVQRLVRPAKAGHAGTLDPLATGVLVVAVGRATRLIEYVQ
QKQKRYEASFLLGRRSPSEDIETEVSEIVEATIPTLTEINAALPRFVGSIEQRPPAYSAV
HVAGRRAYDLAREGKEVSIAPRSVEVDRLDFTRYEYPELDLAIDCGSGTYVRSLGRDLAE
SLGTGAVMSRLVRTAIGEFTLNQSVAIDELTPERIEEELVPLAVAVSHLPQMMLSSEQVR
ELEFGRTIAVEGYRAGAEIAGINGRGDLVAVLTEKRAGILKVLRNFAPSV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcttggatttctgaatatcaacaaaccggcagggtggacgtcgagagacgtagtaaac
cgtgtgcagcgacttgtgcgacctgccaaggcggggcatgcggggacgcttgatccgttg
gcgactggagtgctggtcgtggcggtggggagggcgacgcggttgatcgaatatgtgcag
caaaagcagaagcgctatgaggccagcttcttgctgggccgcaggagtccgagcgaagat
atcgagaccgaggtgagcgaaattgttgaagcaacaattccaactctcactgaaatcaat
gcggccttaccgcgatttgttggaagtattgagcaacgtcctcccgcctattcggcggtc
cacgtcgcaggtcgacgcgcttatgatttggcccgtgaggggaaagaggtctcgatcgct
ccgcgttccgtcgaagtcgatcgtctcgacttcacccgctatgagtacccagaacttgac
ctcgcgatcgactgtggcagcgggacgtatgtccgcagtttggggcgagatttggccgag
agtttaggtacaggtgccgtgatgagcaggctcgtgcgtacggcgattggcgaattcacg
ctaaatcaatcggttgctatcgacgagcttactccggagcggatcgaagaagagttggtt
ccgctggcagtggctgtcagccatctgccacagatgatgctctctagtgagcaagtcagg
gagctggagtttggccgaacgatcgctgtggagggttaccgtgcgggtgccgagattgcg
gggattaatggtcgtggcgaccttgttgccgtgctgacagagaagcgagcggggattctc
aaagtgcttcgcaactttgcgccatcggtatga
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