Bythopirellula goksoeyrii: Pr1d_18700
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Entry
Pr1d_18700 CDS
T09914
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgok
Bythopirellula goksoeyrii
Pathway
bgok03420
Nucleotide excision repair
bgok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pr1d_18700 (pcrA_1)
03430 Mismatch repair
Pr1d_18700 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgok03400
]
Pr1d_18700 (pcrA_1)
Enzymes [BR:
bgok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pr1d_18700 (pcrA_1)
DNA repair and recombination proteins [BR:
bgok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pr1d_18700 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Pr1d_18700 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
CarD_TRCF_RID
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEG34589
UniProt:
A0A5B9QA03
LinkDB
All DBs
Position
2274026..2276350
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AA seq
774 aa
AA seq
DB search
MDPLFEALNPAQCDAVRHVDGPMLVLAGPGSGKTRVVTHRIAHLLREGIPASQMLALTFT
NKAADEMHQRVEELAPGQRVWVSTFHRFGARLLRHYSDLVGLTPNFTIYDTTDAKQTLAR
VIDVAKINTLHYTPERIAHAISDAKNKLITADKFEPRPGSPLSQIVAEVYPAYQKRLIAS
SAVDFDDLLLHVAQLLFQSPEVRAELDERFRYLLVDEYQDTNHVQYVMLRALSVDYPNLA
VTGDPDQSIYGWRGADIKNILQFETDFPQVKVVRLEQNYRSTKRILRVADDLIRHNLRRK
QKSLFTDNDEGTSVRLVEYASQDAEAAGIAKRIAEAIESGQRRACDFAILYRVNALSRAL
ERGLREAGVPYQIIRGQEFYGRKEIKDVLAYCQLINNPRDDQAVLRTINTPTRGIGRKTV
DLLSDHAYRQGISLLDAAREAATIPDLAARSAKKVAVYVALMERLCGLADSDVEEILGTV
LEESGYRGSLSESDSEEDLNRLANIEELLTDARQFDEKNPGGGQLETYLENAWLVNETDD
WESETDKVTLMTLHAAKGLEFPVVFIVAVEHGLLPHERSTSDEAQMEEERRLAFVGITRA
EDELQLSFAVERDFRGQRRHTVPSSFLMEIPREALHLETSVDQMEDWNDESWLDEEHDYL
DVDQSEDTDDVSFDFGAAAKPAQKELTQKSPNWPMVAGQITTAAALAGEVQASESRVSPD
AFFQGMTVVHPDHGVGKIVALSGSGKNRRATVRFVTVGEKRYILAHSPLRPAGK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
gtggacccactcttcgaagcactgaatcctgcccaatgcgacgccgtgaggcatgtcgac
ggaccgatgctcgtactcgctgggcctggcagtggcaagacccgggtcgtgacccatcgc
attgcccacctgctacgggaggggatccccgcctctcagatgctggctctcacgtttacc
aacaaggcagccgatgagatgcatcagcgggtcgaggaactggcacccggccagcgcgtt
tgggtcagcaccttccatcgctttggggctcggctgctcaggcactactcagacctagtc
ggtctgaccccaaatttcacgatctacgacaccactgacgccaagcaaacccttgccagg
gtcatcgatgtggccaagatcaatacgctccactataccccggagcggatcgctcatgct
atcagcgacgcaaagaacaagctaatcacggccgacaaattcgaaccgcgccctgggagc
ccactgagccaaattgttgccgaggtctaccccgcctaccaaaagagactaatcgcttcg
tccgcagtcgacttcgacgacctgctgctccacgtcgctcagctgttatttcaaagtccc
gaggtccgcgctgagctggatgagcgatttcgttatctgctggtggacgagtatcaggac
accaaccatgtgcaatacgtcatgctccgtgccctctcggtcgactaccccaatctggca
gtgacaggcgaccccgaccaatcaatctatgggtggcgtggagccgacatcaagaacatc
ctgcaatttgagacggactttccccaagtaaaagtcgtccggctagaacaaaactaccgc
agcacgaagcggattctgcgcgtagccgatgacctaattcgccacaatctgcgtcgcaaa
cagaagtcgctcttcaccgacaacgacgaaggcacttccgttcgcctggtggaatacgca
agccaggacgccgaagccgctggcatcgccaagcgaattgccgaagcgattgaatcaggt
cagcgtcgcgcttgcgacttcgctatcctctaccgagtgaatgccttatcgcgtgccttg
gagcggggattacgcgaggcgggcgttccctaccagatcatccgtggccaagagttctac
gggcgcaaagaaatcaaagacgtgctggcttactgccagctcatcaacaatcctcgcgac
gaccaggctgtgctgcgcacgatcaacaccccgacccgcggcattggccgcaagacggtc
gatctcttgagcgaccatgcctaccgccaagggatatcgctgctggacgcggcccgcgag
gctgccacaattccagatcttgccgcccgttctgcgaagaaggttgccgtttatgtggcg
ctgatggaacgcctctgtggtttagccgatagtgacgtggaggagatcctcggcacggtg
ctggaagaatcaggctatcgggggtctttgagcgaaagcgacagtgaggaggacctcaat
cgcctggcgaacatcgaggaactcttgaccgatgcccgccaatttgacgaaaaaaatccc
ggtggtgggcagttagagacttatctagaaaatgcctggctcgtgaacgagaccgacgac
tgggagagcgaaacggacaaggtcaccctgatgacgctccacgcggccaagggtttggag
tttccagtggtgtttatcgtggcggtcgaacatggcctgttgccgcatgaacgcagtacc
agcgacgaagcccagatggaggaggaacgccgacttgcatttgtgggtattacgcgagcc
gaagacgaactccaactcagctttgccgtcgagcgagactttcgtggccagcgtcgtcac
acggtccccagttcgtttttgatggagatacctcgcgaagccttgcatctggagacttct
gtggaccagatggaggattggaacgacgaatcctggctcgacgaggagcatgattattta
gacgtcgaccaatcagaagacaccgacgatgtttccttcgatttcggcgcggcagccaaa
ccagcacaaaaagagttaactcaaaaatcaccgaactggccgatggtggctgggcaaatt
acgaccgcggcagcactggctggagaggtacaagcctctgagtcgcgggtttcgcccgac
gcgtttttccaggggatgactgtggtccatccagatcatggcgtcggcaagatcgtcgca
ctttctggctccggcaagaaccgccgagcgacagtccgtttcgtgacggtcggcgagaaa
cgctacatccttgctcacagcccgctgaggccagcagggaagtag
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