Bythopirellula goksoeyrii: Pr1d_19310
Help
Entry
Pr1d_19310 CDS
T09914
Symbol
hup_1
Name
(GenBank) DNA-binding protein HU
KO
K05788
integration host factor subunit beta
Organism
bgok
Bythopirellula goksoeyrii
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgok03032
]
Pr1d_19310 (hup_1)
03036 Chromosome and associated proteins [BR:
bgok03036
]
Pr1d_19310 (hup_1)
03400 DNA repair and recombination proteins [BR:
bgok03400
]
Pr1d_19310 (hup_1)
DNA replication proteins [BR:
bgok03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Pr1d_19310 (hup_1)
Chromosome and associated proteins [BR:
bgok03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Pr1d_19310 (hup_1)
DNA repair and recombination proteins [BR:
bgok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Pr1d_19310 (hup_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF4011
Ribosomal_60s
Glyco_trans_1_2
DUF7690
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QEG34649
UniProt:
A0A5B9QA73
LinkDB
All DBs
Position
2349359..2349766
Genome browser
AA seq
135 aa
AA seq
DB search
MTKKEIVRTISEEIGLTQLKTKEIVQKTFDAIVETLVEDRRIELRNFGVFEVKRRAARKA
RNPRTGEKVFVPEKFVVTFKPGKEMEERVHELERQANAAAEAAHRAASGSPPPPIETTNH
ETLSPPTTYVPKAGT
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaaaaagagatcgtgaggacaatttctgaggaaattggcctgacccaattgaag
acgaaggaaatcgtacagaagaccttcgacgcgattgtggagacccttgtcgaggaccgg
cggattgaattgcggaatttcggagtgtttgaggtcaagcggcgtgctgctcgcaaggcc
cgaaatccacgtacgggggagaaggttttcgtccccgagaagtttgtcgtgacattcaag
ccgggcaaagagatggaagagcgtgttcacgaactcgagcggcaggccaacgccgccgcc
gaagcagcccaccgggcagccagtggttccccaccaccacctatcgaaacaacaaatcac
gaaactctttccccgccaacgacttacgttccaaaggctgggacatag
DBGET
integrated database retrieval system
