Bythopirellula goksoeyrii: Pr1d_22500
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Entry
Pr1d_22500 CDS
T09914
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgok
Bythopirellula goksoeyrii
Pathway
bgok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pr1d_22500 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgok03019
]
Pr1d_22500 (rhlE)
Enzymes [BR:
bgok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pr1d_22500 (rhlE)
Messenger RNA biogenesis [BR:
bgok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pr1d_22500 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QEG34961
UniProt:
A0A5B9QLF9
LinkDB
All DBs
Position
complement(2730140..2731483)
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AA seq
447 aa
AA seq
DB search
MKFEDLGLSQYLLRAICGEGYETATPIQAQAIPIVLEGHDLMGCAQTGTGKTAAFALPTL
HALAGDKRTKLRKRPIRSLVLAPTRELAVQVTASFAKYGKFTQLHTTTIYGGVNQNPQVR
ALQKGVDIVVATPGRLLDLMNQGHVDLKQVEILILDEADQMLDMGFLPDLKRIVDAVPND
RQTLMFSATMPDAIRRLAGQWLDDPKHLQVSPNSSPVETVKQSVFFVNTHHKPQMLTHYL
QNTAWERTLVFARTKHGADKIVKQLVRDGIRAAAIHGNKSQNARARTLEQFKSNRPPVLV
ATDIAARGLDVNSVSHVINYELPEVPEVYVHRIGRTGRAGASGIATSFCGGEERGRLRQI
ERLTRRAIDVEVTHAEYALPERSNTGAKGDSPRPRRSSGRKFYGKKPQSGSTRPKSPKAG
TQKSGGQANSSKPRRPKRRPRPAKTGE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaagatttaggtttgtctcagtacttgctccgtgcgatttgtggcgaaggc
tatgagacagctactcccatccaggcccaggcgattcccatcgtacttgaaggtcacgac
ctcatgggctgtgcccaaactggtacgggcaagacggcagcgtttgcattaccaaccctc
catgcgttggccggtgacaaacgcacaaaactccgcaagcgaccgatccgctcgttggtt
ttggcacctacgcgtgaactggccgtgcaagtcaccgcgagctttgccaagtacggaaaa
ttcacgcagctgcacacaaccaccatctacggcggagtgaaccagaatccccaggttcgc
gccttgcagaaaggtgtcgatatcgtagtggccacacctggacgtctgttggatttgatg
aatcagggacatgttgatctgaaacaggtggaaatcctgatacttgacgaagccgaccaa
atgctcgacatgggcttcttgcctgatttgaagcggattgttgacgccgtacccaatgat
cgccaaactttgatgttttctgcaaccatgcctgatgcgatccggcgactggcagggcag
tggcttgatgatccaaagcatcttcaagtgtctccgaattcttctccggttgagacggtc
aaacaatccgtcttcttcgtcaacacgcatcacaaaccgcaaatgctcacgcattatctg
caaaatacggcctgggaacgcacgttggtttttgctcgcaccaaacatggggcggacaag
atcgtcaaacaacttgtgcgcgacggcattcgtgctgctgcaattcatggcaataaaagc
cagaatgccagggcgcgtactctggagcagttcaaatcgaatcgtccccctgtactggtt
gccaccgatattgcggctcgagggcttgatgtcaactcagtctcacacgttatcaactac
gagttgcctgaagtcccggaggtttacgttcatcgtattggccggactggcagagcaggt
gccagtggaattgccacttcattctgtggtggtgaagagcgtggccgcctacgtcagatc
gagcggcttactcgccgtgcgatcgatgtggaggttacgcacgcggaatatgccctgccg
gagaggtccaataccggagcgaaaggagattcgccgcggccaagaaggtcctccggcaga
aaattctatggcaagaaacctcagtccggttctacgcgtccaaagtcgcccaaagcgggt
acgcagaaatctggaggacaagctaactccagtaagcctcgccgccccaaacgtcgccca
cgacctgcaaagacaggtgagtaa
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