Bythopirellula goksoeyrii: Pr1d_23850
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Entry
Pr1d_23850 CDS
T09914
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bgok
Bythopirellula goksoeyrii
Pathway
bgok00061
Fatty acid biosynthesis
bgok00071
Fatty acid degradation
bgok01100
Metabolic pathways
bgok01212
Fatty acid metabolism
bgok02024
Quorum sensing
bgok04146
Peroxisome
Module
bgok_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pr1d_23850 (lcfB_2)
00071 Fatty acid degradation
Pr1d_23850 (lcfB_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pr1d_23850 (lcfB_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pr1d_23850 (lcfB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bgok01004
]
Pr1d_23850 (lcfB_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bgok04147
]
Pr1d_23850 (lcfB_2)
Enzymes [BR:
bgok01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pr1d_23850 (lcfB_2)
Lipid biosynthesis proteins [BR:
bgok01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pr1d_23850 (lcfB_2)
Exosome [BR:
bgok04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pr1d_23850 (lcfB_2)
Exosomal proteins of breast cancer cells
Pr1d_23850 (lcfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QEG35094
UniProt:
A0A5B9Q7S8
LinkDB
All DBs
Position
complement(2899968..2901437)
Genome browser
AA seq
489 aa
AA seq
DB search
MTNLYQVLKATAERQPANIAVSDCENCSTVTYAQLLGRVDGLAKRFRAAGIVPGDCVGLH
VASGLNYIIRTYALWKLGACVVPIPLELAPREKRQVCQRIAIDTIVSSDRSVGFLSGIDA
HEIARVGSCRIIRMTPLRQHPTDFTSVNAAFIRFSSGTTGAAKGVVLSHETIFDRVHAAN
AGLELTPDDRVVWLLSMSYHFAVSIVAYLTFGATIILHKRAIDLGRALVEDAAGQRGTVI
YGSPSHYELMARDRSGRELPDLRLAISTATALSADTARAFHERFDVPLTQAYGIIEIGLP
CINLCHAGEKLDSVGQPQPSFGVRLVNRDDAGGMSSIGFRGKGFLDAYYDPWQPRSEIMQ
DGWFYTGDLGEMDEEGSLYIRGRASEMINVGGMKFFPREVEEVLNTHPAIEEAVVFAARK
GNAREFACAQVVPRAEARVIPTPVELRQFCAKRLAHFKVPQEVEFVASLERTASGKIIRS
AVVREIQAS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatctctaccaagtcctgaaagctactgccgagcggcagcccgcaaacattgcg
gtctccgactgcgagaattgtagcaccgtgacttatgcgcaattactgggtcgagtggac
ggtttggccaaacgtttccgggcagccggtatcgtcccaggcgattgcgtgggtctgcat
gtggccagtggcctcaactacatcatccgcacgtacgccctctggaaacttggcgcgtgt
gtcgtgccgattccgttggaacttgctccgcgcgagaaacgtcaagtctgccagcggatc
gcgatcgacacgattgtctcgagcgatcgatctgttggttttctcagtggcatcgacgcc
catgaaattgcccgagttgggtcatgccgcatcatccgcatgactccccttcgacagcac
cccaccgactttacctcggtcaatgcagcgtttatccgtttcagttctggcacgacgggt
gctgccaaaggcgtggtgctttctcacgaaacgattttcgaccgcgtccatgctgctaat
gctggattagaattgacgcccgacgaccgggttgtgtggctgctttcaatgtcctatcac
tttgccgtgtcaattgtcgcgtatctcacctttggagcgactatcatattgcataagcgc
gccatcgacttgggtcgtgcgctggtggaagacgcagcaggacaacgtgggaccgtcatc
tacggcagtccctcgcactacgagttgatggctcgtgaccgtagcggacgggaactgcca
gacttgcgacttgccatatcgacggcaaccgctctttctgcagacacagcccgagctttc
cacgagcgattcgatgtgccgctcacacaggcctacgggatcatcgagatcggcttgcct
tgcattaacctctgccacgcgggtgagaaactggattctgtagggcagccacaaccaagt
tttggagtgcgtctagtgaaccgcgacgatgcagggggcatgagcagcatcggttttcgc
ggcaagggattcttggacgcctactacgatccttggcaacctcgaagtgaaatcatgcag
gacggctggttctacacgggcgacctgggtgagatggacgaagaaggctcgctgtacatt
cgtggccgcgcaagtgagatgatcaatgtcggcggaatgaaatttttcccccgtgaagta
gaagaagttctcaacacgcacccggcaatcgaggaagctgttgttttcgctgcacgaaaa
gggaacgcacgcgagtttgcttgcgcacaagtcgttcctcgtgccgaggcgcgagtgatc
cctacccccgttgagctacggcaattctgtgccaagcggctcgcccatttcaaagtccct
caagaggttgaattcgttgcctcacttgaacgaacggctagcggcaagatcattcgctcg
gccgttgtccgagaaatccaggccagctga
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