Bythopirellula goksoeyrii: Pr1d_27030
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Entry
Pr1d_27030 CDS
T09914
Symbol
yesW_1
Name
(GenBank) Rhamnogalacturonan endolyase YesW precursor
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bgok
Bythopirellula goksoeyrii
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Pr1d_27030 (yesW_1)
Enzymes [BR:
bgok01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Pr1d_27030 (yesW_1)
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
QEG35404
UniProt:
A0A5B9Q8K1
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All DBs
Position
3237905..3240025
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AA seq
706 aa
AA seq
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MHIRYLIFTILCMQTTSVAFAQRQMENLTRGTVAVRQTDGVYVGWRLLGTDPEGIEFNVY
RQVGDSERIRLNDEPISGATNLVDRDAPRDGGLSYTVVPVVDSQELNSTVAANVWEQSYL
EFPIQPIDDYRPGDASVADLDGDGQLDIVLHQTSRGRDNGSAGVTGTPILDGYKFDGTHL
WRIDLGKNVREGEHYTQFMVYDLDGDGRAELVCKTADGTVDGQGKVIGDAEKDWRTLDEG
SQRHGRILDGPEYLTVFDGLTGKALQTVDYIPSRLPINGWGGIGGNAGNDNYGNRCDRFL
ACVAYLDGRRPSVVMCRGVYGRIVMAAWDWRDGELSVRWVFDSGMSYPPYANASPFSGMG
GHSLSVADVDDDGKDEIIYQAMVIDDNGKGLYSTGLRHGDAMYITDMYPNRDGMEVFTIQ
ENENDAELFQTPGAAMRDARTGEILWSHSPVIDVGSGMAADIDPRYLGYEAWGGPGGLRN
SEGESIGPAPRETGWSVWWDGDPLRELLSPGRPERSRTPQRGSAAREARGNAEPRPNIEQ
LRGPREDRDEQDTQARSRFRETELPDQQQNRELLRRRFGPQPTRISKWNWNTEEMDPLVE
LDGVSFSRGPSIMGDLIGDWREEILLASPDGKSLRLYTTTIPTDLRLPTLLHDPQYRLGL
AWQNVVYNKPCYPSYYLGDGMKTPTRPHLNLVGKGEAIELKTAIIK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcatattagatacctgatattcacaatcctgtgtatgcaaactacttctgttgcgttt
gcgcaacgccaaatggagaatctcactcgtggtaccgtagcagttcgtcagacagatggc
gtgtatgttggttggcgactgttgggaacagatcctgaaggaatcgagttcaatgtctat
cgtcaggtcggcgacagtgaacgcataaggttgaacgacgaaccaattagtggcgcgacg
aatctcgtcgatcgagatgctcctagggacggagggctatcgtataccgtggtgccggtt
gtcgatagtcaagaattgaactcgacggtggcggctaacgtgtgggaacagagctatcta
gagtttcccatccaacccatagacgactatcgtcctggtgacgcgtctgttgccgatttg
gacggcgatggccagttggacatcgtactgcaccagacttcgcgcgggcgcgacaacggc
tcagcaggtgtgaccggtacaccaatcctcgacggctacaagttcgacggcacccactta
tggcggatcgatcttggcaagaatgttcgcgagggagagcattacactcagtttatggtg
tacgatcttgacggcgacggacgggcagaacttgtctgtaagacagctgatggtacggtc
gatggtcagggcaaagttatcggtgatgctgagaaggactggcgaaccttggatgaaggt
tctcaaaggcacggaaggattctcgatggtccagaatacctgactgtgttcgacggactt
actggcaaggctctccaaacagtcgactacattccgagtcgtcttcctattaacggctgg
ggcggaattggaggcaacgccggcaacgataattacggtaatcgctgtgatcgcttccta
gcctgcgttgcctatctagacggtcgccgcccgagtgtcgttatgtgccgtggagtctac
ggacggattgtgatggctgcttgggactggcgagacggtgaactttcggtccggtgggtg
tttgattcggggatgagctatcctccgtatgcgaatgcctcacccttttcaggaatggga
ggtcattccctttcggtggctgacgttgacgatgatggcaaagacgaaatcatctaccag
gccatggtgattgatgacaacgggaaaggtctgtattcgacaggtcttcggcatggagac
gctatgtacatcaccgacatgtatccaaaccgtgatgggatggaggtgtttaccatacaa
gaaaacgagaacgacgcggaattattccaaactcctggtgcggctatgcgagacgctcgg
accggagaaatactttggagccacagtccagtgatcgatgttgggagcggaatggcagcg
gacatcgatccacgatatctcggctacgaagcatggggaggcccgggaggtctgagaaac
tccgaaggagagtccattggccctgcacctcgggagacaggatggtcggtctggtgggat
ggcgacccgctccgcgaactcctgtccccaggccgacctgagcgaagtcggacaccccaa
cgcggaagtgccgctcgagaggcgcgaggaaatgctgagcctcgccccaatatcgaacaa
cttcgcggacctcgcgaggatcgcgatgaacaagatacgcaggcgcgatcgcgttttcgg
gaaacagaactcccagaccaacagcagaatcgcgaacttttacggcgccgcttcggcccc
cagccgacacggatttctaagtggaattggaatacggaagaaatggatccgctggtagag
cttgatggcgtttcgtttagccgaggccccagcatcatgggggacctaattggtgattgg
cgagaggagatactcctggcgtcgcctgacggcaagtcgctacgactctacacgacgact
attcctaccgatttacgattgcccactctgttacacgatcctcaatatcgattgggactc
gcgtggcaaaacgttgtctacaataaaccgtgttatcccagttactacttgggagacggg
atgaaaactccaacacgcccccacttgaacttagtcggcaagggagaagccatcgagttg
aaaactgccataataaaatga
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