Bythopirellula goksoeyrii: Pr1d_36500
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Entry
Pr1d_36500 CDS
T09914
Name
(GenBank) Cadherin domain protein
Organism
bgok
Bythopirellula goksoeyrii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
PepSY
Cadherin_CELSR2_9th
Big_13
RibLong
CIS_spike_tip
Motif
Other DBs
NCBI-ProteinID:
QEG36337
UniProt:
A0A5B9QBC0
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All DBs
Position
complement(4352520..4358267)
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AA seq
1915 aa
AA seq
DB search
MSKRHKQGQDNTSGMDAEKNSQKPGRAKAALQADTLEPRILLSATWVDADTGDDHQNEAD
HQDQDHNDVVAHMHGTGGDDDLLFGKRIGGSHFDDDGDVKFEKDYRADDDSRLDRHNTVD
FSDSRSGVILDLTDSDEEKQERSLRESESSHATQGVVGSDYDDIFEFSKPEDGQTYKVDG
GGGTNSIDLSNVDSNHVKFGDGTITIDDGDSSFTIEYQNIDSIEFADANALVVDGDLSGY
EVTEETIIVDGDIALRVDFDGEGSAEIDYDVHEDRLHVTDVSDTGENSILTLDQMAGPDA
EFDVTLLDAPLIINAETTIDHLTVESRLQHAVVVNGSVGDFEIQGHLGGKGSVDVNGDVA
SFTLTGNSDLSGSVTVSGDLGATTVGDDMSGSLKVGGDLESLTIGDKVDGKASITVAGDA
GNISIGGGIDGSLLVGGDAALVTIDGAMSSATLDIHGSAEAISIGGNINDKSTIHIGAAS
SFSSGNVAGSVTIDSSVRGVTTGTISGSMEIHGDVSSLSLTSNADLSGTVTIAGNLGATS
IGDDMTGSLHVKGDLDTLSIGDNVSSSAAINVAGSSGDISIADRMDGSLIVGGDAGTVAI
GASVNNATVDIGGKAEAISIGGNINGKSTIHAGGAFSFSSGNLAGTVVIDSSVEEITTRT
ISGSLKIDGDVSKLSLEGNGDLKGTVKIAGDLGATTIGDNMTGSLIVGGDLKSLDVSDQF
TSGASIEVTGSAGNIHIGNQMVRGTSIIVEGDLESVTVDKKINDGAFIRAGAVSGRMTIS
EGETVHNEDFSSPAEVIYDGTELKVKLQNSAPTDLDLSGAIVTENSAEGTIVGTAAAVDP
DKDETFSYALTDNAGGRFEIDAETGEVRVAKGADLDFESQASHDVTVQVTDSAGNTYEEA
FSIAVTDIPTVTITGNTVLSVSDGPFDDLVINASTVTIDGTLEVNGDLTIKSLYRLMDGE
IHVGGDVTTLDNSFGGSGTVVLDGSGDQTISAGGGTGEISRLSIEKTSGTVTLIDEIEIS
GSYEDNGSVVDATGARVELQGNPNIAASGTTFGDLELNASTVTIDGTLDVDGDLTITSLY
RLQSGGIHVAGDITTLDASIGGSGTFVLDGTGDQTISAGGGVGELNHLSIEKPSGTVTLI
DEIEISGSYKDNGTNVDATGAKVELQGNPNIAASGTTFGDLELNASTVTIDGTLDVDGDL
TITSLYRLQSGGIHVAGDITTLDASIGGSGTFVLDGTGDQTISAGGGVGELNHLSIEKPS
GTVTLIDEIEISGSYKDNGTNVDATGAKVELQGNPTISANSTMFGDVELNASTVKIDGDM
WVHGDIDVTQLYRLEGGVIHVAGSINMIDSSWGGSGQIVPWNQAPTDLDFKGGSIAEDAK
PGTVVGAAYATDPDRDDKLTYELTDNADGRFEIDAETGVVSVARGADLDFENAGTHEISI
KVTDSAGHERMESFEIQVTDVNEAITDLDFKGGSIPENAKPGTVVGAAYATDPDRDDKLT
YELTDNADGRFEIDAETGVVSVARGADLDFENAGTHEISIKVTDSAGHERMESFEIQVTD
VNEAITDLDFKGGSIPENAKPGTVVGAAYATDPDRDDKLTYELTDNADGRFEIDAETGVV
SVARGADLDFENAGTHEISIKVTDSAGHERMESFEIQVTDVNEAITDLDFKGGSIPENAK
PGTVVGAAYATDPDRDDKLTYELTDNADGRFEIDAETGVVSVARGADLDFENAESHTIQI
TVTDSAGNTREISHVIELEDQADTPQPEDVGREVNELHTADSDDESRSSEERINSKLDRT
EELTADELLYRPGLSADGFVPVAVGLNEYIPQDIDWKSTDFGEVSVLNNLEEQAPETIDP
QGALSEYDTSPADVEEVATLVAAGNETGLLAKLWGFARAYRGVSESGSSNRQERS
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacgtcacaagcaaggtcaagataatacctcaggcatggatgcagagaagaac
tcgcagaaaccgggacgagcgaaggcggcattacaggccgatacgctcgagccaagaatc
ttgctatcggctacctgggtcgatgccgacaccggcgatgatcatcagaatgaagccgat
caccaagaccaggatcacaatgatgttgtcgctcacatgcacggcacggggggcgacgac
gacctgttgttcgggaagcgaatcggtggttcgcacttcgatgatgatggcgatgtgaaa
ttcgaaaaagactaccgtgctgacgacgactccaggcttgatcgtcacaacaccgtggat
ttctccgactcacggtcaggagtgattcttgacctgacggatagtgatgaagagaagcag
gaacgaagtctgcgagaaagcgaatcgtctcatgcgacccaaggggttgtgggatcggat
tacgacgacatcttcgagttctccaagccggaagacgggcagacgtacaaggtcgacggt
ggcggcgggacgaacagcatcgatctctcgaacgtcgactcgaaccatgtgaagttcggc
gacgggaccatcacgatcgacgatggcgacagcagcttcaccatcgagtaccagaatatt
gattcgatcgagtttgccgacgccaacgcactggtcgtcgatggagacctctcgggctac
gaggtcaccgaggaaacgatcatcgtcgacggtgacattgccctgcgagttgatttcgat
ggcgaaggtagcgccgagatcgattacgacgtgcacgaagaccgtttgcatgtgacagac
gtgtcggacacgggagagaattcgattctcacgttggaccaaatggccggtccggatgct
gagttcgatgtgaccctcctcgacgcgccgctgatcatcaatgcagagaccacgattgat
cacttgaccgtggagtctcgcctgcaacatgccgtcgtggtgaacggctccgtgggcgat
ttcgagattcaaggtcacttgggtggcaaaggttcggttgatgtaaatggcgatgtcgcc
tcgttcacgctcaccgggaattcagacttaagtggctccgtcacagtctcgggagacctg
ggcgccaccaccgttggcgatgacatgtcgggttcgctcaaggtcggaggcgatcttgaa
tcgctgacgattggcgacaaagtcgatggaaaggcatcgatcacggtagccggcgatgcc
gggaatatctcaatcggcggtggcatcgatggttcactgttggttggtggcgacgctgcg
ttggtgaccattgatggagcgatgagcagtgccacgttggatattcatggctcggccgag
gcgatcagtatcggcggcaacattaatgacaagtcgacaattcacatcggggctgctagc
tcattttcctcaggaaatgttgccggaagtgtgacgattgattcgtcggttcgtggagtc
accacaggcaccatcagcggatcgatggagattcatggcgacgtctcttccctttcgctc
acaagcaacgccgatttgagcggcacggtaaccattgctggcaaccttggagcaacctcg
atcggcgatgacatgaccggctcgctccacgtcaagggcgatcttgatactctgtcgatt
ggtgacaatgtctcgtccagcgcagcgatcaacgtcgccggcagctccggggatatctcg
attgccgatcgcatggatggctcgctgattgtgggtggcgacgcgggtacggtggcgatt
ggtgcgtcggtgaacaatgcaaccgtggatattggcggtaaggccgaagcaatcagtatc
ggcggcaacatcaatggcaagtcgacgattcacgcgggaggtgcgttttccttctcgtcg
ggcaatctggccggaacggtggtgatcgactcctcggtcgaagagattacgacccgcact
atcagcggttcgctgaagatcgacggagacgtatccaaactgtctctagaaggtaatgga
gaccttaaaggaacggtcaaaattgccggcgatcttggtgcgaccacgattggggacaac
atgacaggctcgctcatcgtcggtggcgacctgaagtcgctggacgtgagtgatcaattc
accagtggcgcttcgatcgaagtgactggttcggccgggaatattcacatcgggaaccaa
atggtgcgaggcacgtcgatcatcgtcgagggtgatctcgaatcggtcaccgtggacaag
aaaatcaacgacggggcattcattcgagcaggtgccgtttcgggaaggatgacgatcagt
gaaggagagactgtccacaacgaggacttctcctcacctgccgaggtgatctacgacgga
acggaattgaaagtcaagttgcagaattcggcgcccaccgacctcgacttgtctggtgcg
atcgtcaccgagaactcggccgaaggcaccatcgtgggcaccgccgcggccgttgatccg
gacaaagacgaaacgtttagctatgcccttaccgacaacgctggcggtcgtttcgagatc
gacgcggaaaccggcgaagttcgggtcgccaagggagccgacctcgactttgaatcgcag
gcgagccacgacgtcacggttcaggtgaccgattcggccggcaatacctacgaggaagcc
ttctcgattgccgtgaccgatattcccacggtgacgattacaggcaacacggtgctttcg
gtgagtgatggcccgttcgacgatttggtgatcaatgccagcacggtgaccatcgacggt
acgctggaggtgaatggcgatctgaccatcaaaagtctctaccgtctgatggatggagaa
atccacgtgggcggcgatgtgacgacgttggacaactccttcggcggcagcggcacggtg
gttctcgatggatcgggtgaccagaccatctccgcagggggcggaacaggtgaaatcagt
cggctgtcgatcgagaagaccagcggtacggtaacgttaattgatgagatcgaaatctcc
ggctcctacgaggacaacggatcggtggtcgacgccaccggtgccagagtcgaactccag
ggtaatccgaacatcgcagccagtggaacgacgtttggcgatttggaactcaacgccagc
acggtcacgatcgatggcacgctggatgttgacggcgatttgaccatcaccagcctgtac
cgattgcagtcgggcgggatccatgtggccggcgacatcactacactggacgcttcgatc
ggtggcagcggaacctttgttctcgatggtacgggggaccagactatttccgccgggggt
ggagtcggtgaactgaaccatctctcgattgagaaacccagcggaacggtgaccctgatt
gacgagatcgaaatctctggctcgtacaaagataacggaaccaacgtcgatgctacgggg
gcgaaagtcgaattgcagggtaatccgaacatcgcagccagtggaacgacgtttggcgat
ttggaactcaacgccagcacggtcacgatcgatggcacgctggatgttgacggcgatttg
accatcaccagcctgtaccgattgcagtcgggcgggatccatgtggccggcgacatcact
acactggacgcttcgatcggtggcagcggaacctttgttctcgatggtacgggggaccag
actatttccgccgggggtggagtcggtgaactgaaccatctctcgattgagaaacccagc
ggaacggtgaccctgattgacgagatcgaaatctctggctcgtacaaagataacggaacc
aacgtcgatgctacgggggcgaaagtcgaattgcagggcaacccaaccatttcggccaat
agcaccatgttcggcgatgtcgaactaaacgccagcacggtaaagatcgacggagacatg
tgggtgcatggcgacatcgacgttacccagttgtatcgccttgagggtggggtgatccac
gttgccggctcgatcaacatgatcgacagttcgtggggaggcagcggtcaaatcgtccca
tggaatcaggcaccaaccgatctcgacttcaaaggtggcagtatcgctgaagacgccaag
ccgggaaccgtcgtcggggcggcctatgctaccgaccccgaccgtgatgataagctgacc
tacgagctgactgacaatgccgacggtcgctttgaaatcgacgccgaaaccggcgtggtc
tcggttgcccgcggggcggacctcgactttgaaaacgccggaacgcatgagatcagcatc
aaagttaccgattcggccggtcacgagcgcatggagtcgttcgaaattcaggtcaccgac
gtgaacgaagcgatcactgacctggatttcaagggcggcagcattcccgagaacgccaag
ccgggaaccgtcgtcggggcggcctatgctaccgaccccgaccgtgatgataaactaacc
tacgaacttaccgacaatgccgacggtcgctttgaaatcgacgccgaaaccggcgtggtc
tcggttgcccgcggggcggacctcgactttgaaaacgccggaacgcatgagatcagcatc
aaagttaccgattcggccggtcacgagcgcatggagtcgttcgaaattcaggtcaccgac
gtgaacgaagcgatcactgacctggatttcaagggcggcagcattcccgagaacgccaag
ccgggaaccgtcgtcggggcggcctatgctaccgaccccgaccgtgatgataaactaacc
tacgaacttaccgacaatgccgacggtcgctttgaaatcgacgccgaaaccggcgtggtc
tcggttgcccgcggggcggacctcgactttgaaaacgccggaacgcatgagatcagcatc
aaagttaccgattcggccggtcacgagcgcatggagtcgttcgaaattcaggtcaccgac
gtgaacgaagcgatcactgacctggatttcaagggcggcagcattcccgagaacgccaag
ccgggaaccgtcgtcggggcggcctatgctaccgaccccgaccgtgatgataagctgacc
tacgagctgactgacaatgccgacggtcgctttgaaatcgacgccgaaaccggcgtggtc
tcggttgcccgcggggcggacctcgactttgaaaacgcagaatctcacacgattcaaatc
acggttactgactcggcaggcaacacgcgtgaaatatcacacgtgatcgagttagaagat
caggcagatacgccccagcccgaggatgttgggcgagaggtaaacgaattgcacacggcg
gattcggacgatgaatcgcggtcgagcgaagaaaggatcaattccaaacttgaccggacc
gaggagctcactgcggatgaactgttgtatcgtcccggactttcggccgatggatttgtg
ccagttgccgtaggtttgaatgagtacattccgcaagacatcgattggaagagcaccgac
tttggcgaggtttccgtgctcaacaacttggaggagcaggcccctgaaacgatcgatccg
cagggggctctctcagaatacgacacttcgccggctgacgtagaagaggtggcaaccctg
gtcgccgcgggcaatgagaccggtttgctggccaagctatggggatttgccagggcttac
cgaggtgtgagcgaatccggctcctcgaatcggcaggagcgtagctag
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