Bythopirellula goksoeyrii: Pr1d_40830
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Entry
Pr1d_40830 CDS
T09914
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bgok
Bythopirellula goksoeyrii
Pathway
bgok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pr1d_40830 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgok03019
]
Pr1d_40830 (pnp)
03016 Transfer RNA biogenesis [BR:
bgok03016
]
Pr1d_40830 (pnp)
Enzymes [BR:
bgok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Pr1d_40830 (pnp)
Messenger RNA biogenesis [BR:
bgok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Pr1d_40830 (pnp)
Transfer RNA biogenesis [BR:
bgok03016
]
Prokaryotic type
tRNA degradation factors
Pr1d_40830 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH_KhpA-B
KH-I_KHDC4-BBP
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
QEG36747
UniProt:
A0A5B9QCF4
LinkDB
All DBs
Position
complement(4896929..4899052)
Genome browser
AA seq
707 aa
AA seq
DB search
MNKIRVEKQIGSGVFSIETGYLAKQAAGACLVQYGDTTVLSAAASGPARPGIDFFPLMCD
YRERVAAAGKFPGGFMKREGRPTTKETLTARLIDRPIRPMFPEGYNDEVQIQNFVMSSDK
QTDGDVLAMNGACAALGISPLPFQGPLASVRVGYIDGEFIPFPTQDDLEASSLDLIVSGN
KEAVLMIEGFAREMPEDTMAEAIMAAHGFIRELCDLQEELIAKVGTEKMKFEAPPSDGLF
EVLKEKYGARFSEANLIDGKHERHDAVVALRDEAVAELVPDPDAEGAYTLDSFYKNWHDL
ESHVSREQILSGTRSDGRKSDELRDIQCEVDLLPRVHGSAVFQRGETQAFVTVTLGTGRD
EQRVDGLFDEYTKRFMLDYNFPSFSVGECRPIRGPGRREIGHGALAERSVNPVLPDHEKF
PYTIRVISDILESNGSSSMASVCGATLGLMAAGVPISNPVAGISVGLVKEGEKWTLLTDI
IGNEDHFGDMDFKIAGTQNGITGIQLDLKIKGISEEIIRATLKQSREARIEILRKIISTI
ARPRATTAESAPRLLRTKINPEKIGLLIGPGGKTIRGIQEEVGCNIDVDEDGTVTVAAAD
QATAEAGLARVDALTASVQVGKIYDGRVTSVKDFGAFVEILPGRDGLCHISELSNEYVGN
VGDVCSVGDQMKVKVILVDEQDRVKLSRRAAMEELGEQEAEPADAAS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaattcgagtagaaaaacaaattggcagtggcgtcttcagcatcgaaaccggc
tatttagctaagcaggcagccggagcctgtctcgtacagtatggtgacaccactgtgttg
agcgccgccgccagtggccccgctcggcccggcatcgactttttccccctgatgtgtgac
tatcgggagcgggttgccgcagcgggtaaattccccggcggtttcatgaagcgcgaaggt
cgtcctacgaccaaagaaactcttaccgcccggttgatcgaccgacccattcgaccaatg
ttccccgaagggtacaacgacgaagttcaaattcaaaacttcgtgatgtcgagcgacaag
cagaccgacggcgacgtgctggcgatgaacggtgcctgtgccgctttgggtatttcgcca
ctacctttccaaggccccctggcatcggtgcgggttggctatatcgatggcgagttcatt
cctttccccacccaggatgatttggaagcgagctcgctcgatttgatcgtgtcgggaaac
aaggaagccgtgttgatgatcgagggtttcgctcgcgaaatgcctgaggatacgatggcc
gaagcgatcatggccgcccacggattcatccgcgagttgtgtgacctgcaggaagagttg
attgccaaagtcggtacagaaaagatgaagtttgaggcacctccctcagatggcttgttc
gaggttctcaaagaaaagtacggtgccagatttagcgaagcgaaccttattgatggcaag
cacgaacgtcacgatgctgtcgtcgccttgcgagatgaagcagtagcagaattggtcccc
gatcccgatgcggaaggagcttacacgctcgattcattttacaagaattggcatgatctt
gagtcccacgtgagtcgtgagcagattcttagcgggacccgttctgatgggcgtaagagc
gacgaactccgcgatattcagtgtgaagtcgacctcttgccacgcgtgcatggttcggct
gtgttccaacgaggtgagacgcaggcctttgtcacggtcaccttgggtacaggccgtgat
gagcagcgcgttgatggactgttcgatgaatacaccaagcggttcatgctggattacaat
ttcccttcgttctcggtcggcgagtgccgtccgattcgtggtcccggtcgtcgcgaaatc
ggccacggtgccttggctgagcggagcgtcaatcccgtgttaccggatcatgaaaaattc
ccgtacacgatccgcgtgatttccgacatcttggagtcgaatggctctagttcgatggcg
tcggtctgcggtgccaccctggggctgatggcggcgggtgtgccgatcagcaatcccgtg
gctggtatctcggttggtctggtgaaggaaggtgagaaatggaccttactcacggacatc
atcggcaacgaagatcactttggcgatatggacttcaagattgccggcacgcaaaacggc
atcacgggtatccagctcgacctgaagatcaagggtatcagcgaggaaatcattcgtgcc
acccttaagcaatctcgcgaagcccgcattgagatcctgcgaaagattatcagtacgatt
gcacgaccgcgagcgacgacggccgagtcggctccacggttgttgcgtacgaagatcaat
cccgaaaagattggcctcttgattggcccaggtggcaagacgatccgtggtatccaagaa
gaagtcggttgcaacatcgatgtcgacgaggatggcacggttaccgttgctgcggctgat
caagccactgccgaagcgggtctggctcgtgttgatgccctcacggcgagtgtgcaagtc
ggcaagatttacgacggccgcgtgacgagtgtcaaagacttcggtgcgtttgtcgagatt
ctgccgggacgcgatggcttgtgccacattagcgaactctcgaacgagtacgtcggcaat
gtgggcgatgtctgctcagttggggaccaaatgaaggtgaaggtcatcttagtcgacgaa
caggatcgtgtgaaactgagccgtcgcgctgcgatggaagaactcggcgagcaagaggct
gaacctgccgacgccgcgtcttga
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