Bythopirellula goksoeyrii: Pr1d_42870
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Entry
Pr1d_42870 CDS
T09914
Symbol
rpfC
Name
(GenBank) Sensory/regulatory protein RpfC
Organism
bgok
Bythopirellula goksoeyrii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheR
Response_reg
CheB_methylest
PAS_4
PAS_9
HATPase_c
GAF_2
PAS_3
PAS
PAS_10
HisKA
GAF
CheR_N
GAF_3
PAS_8
Diguanyl_cycl_sensor
Fzo_mitofusin
V_ATPase_I
Motif
Other DBs
NCBI-ProteinID:
QEG36947
UniProt:
A0A5B9QD16
LinkDB
All DBs
Position
5153006..5159323
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AA seq
2105 aa
AA seq
DB search
MPKYSASKTTPNSPPPLALVGMGSAAGGLEALEQFFAAMPGDLGLAIVIIQHLATDGSID
LAELVGRISPLPVRQLNAKPVLPEPDHVYVAGEQCQVELGKDGLTATEIEDAVSRAAVVD
SMFQSLADGSKTPVVGIVLSGEGSDGTLGLKAISDAGGMTIAQDPDTAAHDEMPRSAALT
AHADHVVQPRQMPALLEEYVSHLVKMRRAAGEQTQREEIESELPRICDALLEVTEHDFRH
YKTNTLVRRVARRMRVLRLTDATGYLNRLREDREEVRSLFFDLLISVTAFFRDPDTFATL
ANQVIPNLVEHSKNDQSIRIWVPACATGEEAYTLAILLREALDSHESEVEVQIFATDIDP
RALNVARSGTYPLSIAEQLSERRLKRFFTRKGEHFILTKEIRDMCVFSVHNLISDPPFSQ
MDLISCRNLLIYLGQPLQLKLIPLLHYSLRPGGYLLLGSSESLNEHTEIFHPIDQQHRIS
QRRPGPAKPGLFFSSRDNVRRFSTRPSTSNDTDLHQIAQRIVLDEFAPRYAVVNEEAQIV
SSSPGLERFLEFPEGSYQNNIIRLAKPGLRSGLRATLREAQESLRTISRSNLTLQAGDSI
QRAKIVVQPMPEIGEQTGLFMVVFHDNGTFSSPTSSDTSPKEADSEHTITELERELDQTR
HDLETSIRELVNSNEELKSSNEELISFNEELHSANEELKTSKEEVQAGIEALARSRNDQE
NLLHGTKIATIFLDSQGHVRSFTPSIQDIYNLKEGDIGRPLSDITHTAVQMPPLPSGESP
HESEQSQRDEFQTKNDHWYLRRVLPYKQEDRPAGHILTFVDISEQKRAEIRLALAHGITQ
LLAVAESIEDVIPDILEAIRNNLDSDLCALWLIDTDTGSLFCTELASRDNTPRLENFIQS
TLNLRLKRGEGLAGRVWESKEALWFDINSEDQWFHRCLEARESGILSGLAIPILSGRRFQ
GAIEIFANRVLRHEQSKLDMLREIGHEIGQFILRNRIEAQFRDQEARKSAILEASLDAII
TMDFQGKIIDFNVAAETIFDIAREKVIGQPLATVVIPPELREAYHQGLKRYLETGETAVL
GKRIELTALRSDDTQFPVELSISVSHTPDGVPFFTGYLRDITKRKQAEDALRDSEGRASA
LVAASSQMVWTTNAEGKVVEDSPTWRAFTGQTFEEFREDGWTNILHPDEREQVFAAWKAC
AESLEPWNYEYRVRHVSGEWRWTAVRGVPQLRPDGSVLRWVGMNTDITEQKQLQLSLAEN
EQRLLENQEKLVSILQETAASNAKLQVLFDQSFYFAAILDLEGNLTEINDTALTLCGYKR
EEVLGRPFWQTPWWSGSSHVQETIKRAVERAIKGNFFRSELPYWLSDGTQRIADFVLTPA
LNEDGEVIFIVPTGQDITERKQAERVEKQRTEVEHFLSEASTVLSSSLDLDETLAKVTQL
CVPALSDWAFLDLLDETGEVRRVKVSHADPTLDELAERVAKFPAKPDALEHPPAKGLFAG
DAFVIPDFTEEMLEKAAHNEEHKNVIRTVAPRSFLVVPLVTRGKPSGALTLLMTDHSGRR
YGEKDLKVAKELARRAATAIDNSKLYEAGRQANIAKSEFLANMSHEIRTPMTAILGYADL
LAAREDDREKSNFLQVIKRNGIFLLDIINDILDLSKIEAGKLEVSREKFAPQQVVADVRS
TMDVRAREKRLEFKVEYVGKLPAKIESDPKRLRQILINLVGNAIKFTEKGSVRLAVRYLD
DLPDPHLRFDVTDTGVGIAKEQLDSLFESFSQGDASVTRRFGGTGLGLAISQRLAHMMGG
EINVTSTLGEGSTFTCTIQTGNIQTESFHDTPAEHKELEEVSPLASPQRLSCRVLVVDDR
RDVRFLTRRILTDAGAEIAQAEDGLHALEMLEQSTSQGKPWDLILLDMQMPRMDGYQAAA
RMREIGFEGPIIALTADAMHGDMQQCLESGCNAYLSKPIDTQQLLNVVTHFTNQQNEQDV
VSPRVLIVDDSKDACTATQELLMMRGFDVETAFDGASALSVAESFVPQAIVLDISLPDMS
GFEILSRLKEMPQLSTTRFYALTGDGRSDDPRHWQQAGFHHHMTKPTDLDLLEELLRSSE
ENRTE
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatattctgcctccaagacaactccgaattcgcctccaccactagctctggtc
ggcatgggttcggcggcgggaggtttagaagcacttgagcaattctttgctgccatgcct
ggcgatttgggtcttgcaatagtcatcattcagcatctggccactgatggcagcatcgat
ctagctgaattggttggcaggatctctccacttccagttcgccaactcaacgcaaagccg
gtgttgcctgagcctgatcacgtctacgtggccggtgagcaatgccaggttgaacttggt
aaggatgggcttactgcgactgaaatcgaagatgccgtcagccgtgccgcagtggtcgat
agtatgttccaatctcttgccgacggctctaaaacaccggtcgttggaattgtactttcg
ggcgagggtagtgacggaacgctgggactcaaagctatcagcgatgcaggtggcatgacg
attgcgcaagatccggataccgcagcgcatgatgagatgccacgcagtgctgcacttacc
gcccatgcggatcatgttgtacagccaaggcaaatgcctgcattgctggaagagtatgta
agtcaccttgtgaagatgcgacgtgctgccggcgagcagactcagcgcgaggaaatagaa
tccgaactgcctcgtatttgcgacgcgttgcttgaagtgacagaacatgatttccggcac
tacaaaaccaatactctggtgcgtcgtgttgcacgaagaatgcgagtacttcggttgaca
gacgctacgggttacctcaatcggttgcgggaagatcgcgaagaggttcgctcacttttt
tttgacctgcttatcagcgtgacagcttttttccgcgaccctgatacattcgccacattg
gccaatcaagttattcccaatttggtcgaacattcgaaaaacgatcaatcgattcgcatc
tgggtgccagcctgtgctacgggtgaggaagcgtacaccctggccatcttgcttcgtgaa
gctctcgacagccatgaatctgaagtggaagttcagatattcgccacggatatcgacccc
cgggcactcaatgttgcccgctcgggaacctatcccctttccattgctgaacaactatca
gaacgacgtctcaaacgctttttcactcgaaagggcgaacattttatactcaccaaagaa
atccgggatatgtgtgtattctcggtgcacaacctgatcagtgaccctccattctctcaa
atggatcttatctcctgcagaaatcttttgatctacttggggcaacctttgcaattgaaa
ctgattccactccttcactattccttgcgaccgggaggctatctgctgctaggctcctct
gaaagcctgaacgaacatacggagatttttcacccgattgaccaacagcatcgtatttcg
caacgcagaccggggcctgcaaaaccaggacttttcttttcatccagagacaacgtccgt
agattttcgactcgtccaagtacatccaatgacaccgacctccatcaaatagcacagcgg
attgttctggacgaattcgctccaagatatgcagtagtcaatgaagaggctcaaatagtt
tcttcttctcccggcttagaacgctttctcgaattccctgagggatcttatcaaaacaac
attattcgtttagcgaaacctggacttcgcagcggcttaagggctactctgcgagaagct
caagaatcgctgcgcacaatttctcgtagcaatttgacgcttcaagcgggagactctatc
cagagggcgaaaattgttgtgcagcccatgcctgagataggagaacaaacagggctgttt
atggtcgtatttcacgacaatggtacattcagcagcccaacgtcatccgatacctcgccc
aaagaagcggactctgagcacaccattaccgaattggaacgcgaacttgaccagacccgc
cacgacttggaaacttctattcgggaactggtcaactccaacgaggaacttaagtcatcg
aatgaggaattgatttcattcaatgaagagctacactcggcgaacgaggaactaaaaacc
tcaaaagaagaagtgcaagccggaatagaggctttggctcgctctcgaaacgatcaggag
aatctacttcatggcaccaagatagctaccattttcttggattcgcaggggcacgttcga
agttttacaccatcaatccaggatatttacaacctcaaggaaggcgatattggtcgcccc
ttgagtgatatcacccacactgccgttcaaatgccccccctaccctcgggtgaatcacct
cacgagagtgaacagtcacaacgagatgagtttcaaactaagaacgatcattggtacttg
cggcgagtcttgccttataagcaagaggaccgtcctgcaggtcatatccttacttttgtt
gacatctctgagcagaaacgtgcggagattcggctggctctcgcgcacggcatcacgcag
ttgttggcagtcgcagaatccatcgaggatgtgatacctgatattctcgaagcgatccga
aacaatctggactcggacttgtgtgctctttggttgatcgatacagatacggggtcattg
ttctgcaccgaattggcaagtcgggacaatacgccgcgactcgagaactttattcagtcc
acactcaatcttcgtttgaaacgtggtgagggtttggctggacgtgtctgggagagcaaa
gaagctctttggttcgacattaatagtgaagaccaatggttccaccgttgtcttgaagcg
cgcgagagtggcatcttatctggattggccattccaatactgtccggtaggcgctttcag
ggtgccatcgagatttttgccaaccgcgtactacgtcacgagcaatcgaagcttgacatg
ctgcgggaaattggtcatgagattggtcagtttatcctgcgaaaccgaatcgaggctcag
ttccgcgaccaggaagctcgcaagtcagcgattctggaagcttctttggacgcgattatc
acgatggatttccaaggaaagattatcgatttcaacgttgcggcagaaaccatcttcgac
atcgcccgtgagaaggtcatcggtcagccactagcaaccgtagttatcccgcccgaactg
cgggaggcctaccatcaaggacttaaacgatatttagaaactggcgaaactgctgtactt
ggaaaacgcatcgagctcacagcgctgcgcagtgatgacacgcaatttccagtggaattg
tcgataagtgtttcgcacactccggatggtgtgccattctttacggggtacctgagagac
ataaccaaacgcaaacaagcagaagacgctctacgagattctgaaggacgcgctagtgcg
cttgtcgctgcttcatcgcaaatggtttggactactaacgctgaaggcaaagtagtagaa
gactccccaacctggcgtgcttttactggacagacctttgaagagtttcgtgaagacggt
tggactaacatattgcatcccgacgaacgcgaacaggtatttgccgcctggaaagcctgc
gccgaatccttggagccttggaattatgaatatcgtgtacggcatgttagtggtgaatgg
cgttggacggcggtacgcggtgtgccccaactgcggcccgatgggagtgttctgcgttgg
gtagggatgaatacagacatcactgaacaaaagcaattgcagctctcattagctgagaat
gagcagcggctactcgagaaccaggaaaaattagtttcgattcttcaagaaacggcagct
tccaatgcgaaacttcaggtcttattcgatcagagtttttacttcgcagccatccttgat
ctcgaaggtaaccttacagaaatcaatgacacggcactcacactgtgtggttacaaacgt
gaagaagtcttagggcgtccgttttggcaaactccctggtggtctggatctagtcatgtg
caagaaaccatcaagcgagcggtcgaaagagccatcaaaggcaacttttttcgctcggaa
cttccctattggctaagcgatggtacacaaaggattgccgactttgtgctaacacctgct
ttgaatgaagacggtgaagtgatctttattgtgccaacgggccaggatatcacggagcgt
aaacaggctgagcgagtcgaaaagcaaaggacggaagttgaacattttctcagtgaagca
tcgacggtcctgagttcttccttggacctcgatgagacgctagccaaggttacgcagttg
tgtgttcctgcgctatctgactgggcattcctcgacctgcttgatgagaccggcgaagtc
cgccgcgtcaaggtttcccacgctgatccgactctagacgagctggcagagcgagttgcc
aaatttcctgcgaagcctgatgccttagagcatcctcccgccaaaggcttatttgctgga
gacgctttcgtgattcctgatttcactgaagaaatgctcgaaaaggctgcccacaatgag
gagcataaaaacgtaattcgcacggttgctcccaggtcctttcttgtggtaccgctagtt
acccgagggaagccctccggagcgttgactctgctaatgacggatcactcgggacgtaga
tacggcgagaaagatctcaaggttgctaaggaattggcacgccgtgcggcaaccgcaatt
gataattcgaagctctatgaagcaggacgccaagcaaatatcgcgaagagcgagtttctg
gccaacatgagccatgaaatccgcacaccaatgaccgcgattttgggttatgccgatcta
ttggctgctcgggaggacgatcgggaaaaatcaaacttccttcaggtaataaaaaggaac
gggatattcctattggatattatcaacgacattctagatctctcaaagattgaagcaggc
aaactggaagtatctcgtgagaagtttgctccccagcaagtggttgccgatgtacgttct
acgatggacgtccgagctagagaaaagcgactagaattcaaagttgagtacgtcggaaaa
ttgcctgcaaaaatcgaaagcgatcccaagcggctcaggcaaatactcattaatttggtt
gggaacgcgatcaagttcactgagaaaggaagcgtgaggttggccgttcggtatttggac
gacttgccagatcctcacttgcggtttgacgttactgacactggagtgggtatcgcgaaa
gagcagcttgactctctatttgaatccttctcacagggtgatgcatccgtaacacggcgt
tttggtggaaccggactgggattagcgatcagccagcgtcttgcccatatgatgggtggt
gaaatcaatgtcactagcacgctaggcgaaggaagtacctttacttgtacgatccagacg
ggaaatatccaaacagagagtttccacgataccccagccgaacacaaggaactagaagag
gtatcacctctcgccagccctcagcgattgtcatgccgagttcttgtggtggatgatcga
agggatgttcggttcttaactaggcgtattttgaccgatgcgggtgctgaaatcgctcaa
gccgaagatgggcttcatgccctcgaaatgcttgagcaatcgacaagccagggaaagcct
tgggacctgatcctcttggacatgcaaatgccacggatggatggctatcaggccgcggct
cgaatgcgagaaattggatttgaagggccgatcattgctttgacagccgatgcaatgcac
ggagacatgcagcagtgcctcgaaagtggatgcaacgcttatttgagcaaaccaatcgat
actcagcagttgctcaatgtagtcacccattttacaaatcaacagaatgagcaagatgtc
gtttcaccacgcgtacttattgtggacgactcaaaggatgcttgcacagcaacgcaggaa
ctcctcatgatgcgcggatttgatgttgagacggcattcgacggggcttcggcacttagc
gttgccgaaagtttcgttccccaggcaattgtcctggatatttcgctgcccgacatgtca
ggcttcgaaatattgagccgcctgaaagaaatgccccaactcagcacgacgaggttctac
gcactaaccggcgatggtcgtagcgatgaccctcgccactggcagcaagccggatttcac
catcatatgaccaagccgacagaccttgatctccttgaagaacttcttcgcagcagtgaa
gagaatcgcaccgaatga
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integrated database retrieval system
