Bythopirellula goksoeyrii: Pr1d_46550
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Entry
Pr1d_46550 CDS
T09914
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bgok
Bythopirellula goksoeyrii
Pathway
bgok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pr1d_46550 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgok03400
]
Pr1d_46550 (mutM)
Enzymes [BR:
bgok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Pr1d_46550 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pr1d_46550 (mutM)
DNA repair and recombination proteins [BR:
bgok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pr1d_46550 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
BapA_N
Cobl
Anti-TRAP
Sina_RING
Motif
Other DBs
NCBI-ProteinID:
QEG37314
UniProt:
A0A5B9QED4
LinkDB
All DBs
Position
complement(5606015..5606848)
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AA seq
277 aa
AA seq
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MPELPEVETMRRGILPAVGSRITTVSRPRCQKRPIAFQPSFATFRRRVEGTRISKLSRAG
KRVVIWLDSGEALVIEPRMTGLVLVKDAPTREHLRLRLELTDGPISEIYYWDRRGLGSVR
LFSPDSFVDHFGAESLGPDALTITAEQYQTRLGQSQRAIKVALLDQRAVAGIGNLYAAEI
LHVARIHPQRRSDDLNRKHWQSLAEATRAVLTVAIQYEGSTLSDGTYRNALNKQGGYQNQ
HRVYARAGLPCPRCRGSQVERIVQCQRATFFCAKCQK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaagttgaaacgatgcgtcgtgggattctcccggcggttggtagt
cgaatcactacggtttctaggcctcgttgtcagaaacgaccgattgcctttcaaccttcg
tttgccacctttcgccgtcgggtggagggaacgcgtatctcgaaactcagtcgcgctggt
aagcgggttgtcatctggctcgacagtggtgaagccttggtcatcgagccacgtatgact
gggctggtgttggtcaaggacgctcctactcgcgaacatttgcggcttcgcctggagcta
accgacgggccgatatcggagatctactactgggaccgccgcgggctgggaagtgttcgc
ctcttttctccggattcttttgtggatcactttggcgccgagagcttgggtcccgatgcg
cttacgatcacggctgagcagtatcaaacacgacttggccagtctcaacgagcaatcaaa
gtcgccctcctggaccaacgggcggttgcgggaattgggaatctctacgcagctgagatt
ctgcacgttgcgcggattcaccctcaacgtcgttccgacgatctcaatagaaagcattgg
cagtctctggccgaggcaacacgggcggtgctcactgtggcgatccagtatgagggttcc
acgctgagtgacggcacctaccgcaatgctctcaacaaacaaggaggctatcaaaatcaa
catcgtgtttacgcccgtgctggactaccatgcccacgttgccgtggtagccaggtcgaa
cggatcgtacagtgccaacgcgcgacatttttctgtgcaaagtgccagaagtag
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