Burkholderia plantarii PG1: BGL_1c00030
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Entry
BGL_1c00030 CDS
T03632
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bgp
Burkholderia plantarii PG1
Brite
KEGG Orthology (KO) [BR:
bgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgp03032
]
BGL_1c00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
bgp03400
]
BGL_1c00030 (gyrB)
Enzymes [BR:
bgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BGL_1c00030 (gyrB)
DNA replication proteins [BR:
bgp03032
]
Prokaryotic type
DNA Topoisomerases
BGL_1c00030 (gyrB)
DNA repair and recombination proteins [BR:
bgp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BGL_1c00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AJK44557
UniProt:
A0A0B6RGR1
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All DBs
Position
1:3230..5707
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AA seq
825 aa
AA seq
DB search
MTEQHNSQPDNSSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEA
LAGYCNDIHVTIHADNSISITDNGRGIPTDVKLDDKHEPKRSAAEIVMTELHAGGKFDQN
SYKVSGGLHGVGVSCVNALSSWLRLVVRRNGKKHFMEFHRGVAQNRELETRNGVEVSPMT
VVGETENRGTEVHFMADPTIFGTVEYHYDILAKRIRELSFLNNGVRIRLTDQRSGKEDDF
AFVGGVKGFVEYINKTKTVLHPTIFHIIGEKEGVGVEVAMQWNDSYNENVLCFTNNIPQR
DGGTHLTGLRAAMTRVINKYIVDNEIAKKAKVETSGDDMREGLSCVLSVKVPEPKFSSQT
KDKLVSSEVRAPVEEVVAKALEEFLLETPNDAKIICSKIVEAARARDAARKAREMTRRKG
VLDGVGLPGKLADCQEKDPAKCEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKA
RYDKLLSSEQIVTLVTALGCGIGKEDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFLYR
QMPDMIERGYVYIAQPPLFKVKAGKDERYLKDEGELNAHMLRLALQGSELQPGGEAAAIS
GDALGALARSYLLSRGVVARLGRLYDPAALEAIMDGVAIDLAGEQAATASAEALQAAMLA
SDSMKNEVRVKTRYDEVREHWSLRIERPHHGNVRISVIDEEFLLTADYKQLVSTADTFKD
LIGEGALIKRGERSQAVRDFKSAMQWLMSDAERNVSKQRYKGLGEMNPEQLWETTMDPNV
RRLLRVQIEDAIAADGIFTTLMGDEVEPRRAFIESNALRAGNIDV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacagcacaattcgcagcccgacaacagcagctatggcgcctcgtcgatccag
atcctcgagggtctggaagcggtccgcaagcggcccgggatgtacatcggcgacacgtct
gacggcaccggtctgcaccacctcgtgttcgaagtgctcgacaattcgatcgacgaggcg
ctggccggctactgcaacgacatccacgtgacgatccacgcggataattccatctccatc
accgacaacggacgcggcatcccgaccgacgtgaagctcgacgacaagcacgagcccaag
cgcagcgccgccgagatcgtgatgaccgagctgcacgccggcggcaagttcgaccagaac
agctacaaggtgtcgggcggcctgcacggcgtgggcgtgtcgtgcgtgaacgcgctgtcg
agctggctgcgcctcgtggtgcgccgcaacggcaagaagcatttcatggagttccaccgc
ggcgtcgcgcagaaccgcgagctcgagacgcgcaacggggtggaagtgtcgccgatgacc
gtcgtcggcgagaccgagaaccgcggcaccgaagtgcatttcatggccgatccgacgatc
ttcggcaccgtcgaataccactacgacatcctcgccaagcggattcgcgagctgtcgttc
ctgaacaacggcgtgcggatacgcctgaccgaccagcgcagcggcaaggaagacgatttc
gcgttcgtgggcggcgtgaagggcttcgtcgagtacatcaacaagaccaagaccgtgctg
cacccgaccatcttccacatcatcggcgagaaggaaggcgtgggggtggaagtggcgatg
cagtggaacgacagctacaacgagaacgtgctgtgtttcaccaacaacatcccgcagcgc
gacggcggcacccacctgaccggcctgcgcgcagcgatgacgcgcgtgatcaacaagtac
atcgtcgacaacgagatcgccaagaaggccaaggtcgagacctcgggcgacgacatgcgc
gaggggctctcgtgcgtgctgtcggtgaaggtgccggagccgaagttcagctcgcagacc
aaggacaagctggtctcgtccgaggtgcgcgcgccggtggaggaagtggtggccaaggcg
ctcgaggagttcctgctcgagacgccgaacgacgcgaagatcatctgcagcaagatcgtc
gaggccgcgcgcgcgcgcgacgccgcgcgcaaggcgcgcgagatgacgcgccgcaagggc
gtgctggacggcgtcggcctgccgggcaagctcgccgactgccaggagaaggatccggcc
aagtgcgagatctacatcgtcgagggcgactcggccggcggctcggcgaagcagggccgc
gaccgcaagttccaggcgatcctgccgctgcgcggcaaggtgctgaacgtcgagaaggcg
cgctatgacaagctgctgtcgtcggagcagatcgtcacgctggtgaccgcgctcggctgc
gggatcggcaaggaggactacaacctcgacaagctgcgctaccaccgcatcatcatcatg
accgacgcggacgtggacggtgcgcacatccgcacgctgctgctcacgttcctgtatcgc
cagatgccggacatgatcgagcgcggctacgtgtacatcgcgcagccgccgctgttcaag
gtgaaggccggcaaggacgagcgctacctgaaggacgagggcgagctgaacgcgcacatg
ctgcggctcgcgctgcagggctcggagctgcagccgggcggcgaggcggcggcgatctcg
ggcgacgcgctcggggcgctggcgcgctcgtacctgctgtcgcgcggcgtggtggcgcgg
ttggggcgcctatacgacccggccgcgctcgaggcgatcatggacggcgtggcgatcgac
ctggccggcgagcaagccgcgacggcctcggctgaggccctgcaggccgcgatgctcgca
agcgactcgatgaagaacgaggtgcgcgtgaagacgcgctatgacgaggtgcgcgagcac
tggtcgctgcgcatcgagcggccgcatcacggcaacgtgcggatttcggtgatcgacgag
gagttcctgctcacggccgactacaagcagctggtcagcaccgccgatacgttcaaggac
ttgatcggcgagggcgcgctgatcaagcgcggcgaacgcagccaggccgtgagggacttc
aagagcgcgatgcagtggctgatgtcggatgccgagcgcaacgtgtcgaagcagcgctac
aaggggctgggggagatgaaccccgagcagctttgggagacgacgatggatccgaacgtg
cggcgtctgctgcgcgtgcagatcgaggacgcgattgcggcggacgggatcttcacgacg
ctgatgggcgatgaggtggagccgagaagggcgttcatcgagtcgaatgcgctgcgggcg
gggaatattgatgtttga
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